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ArticlesPeer ReviewedFull Text
Identification of SARS-CoV-2 inhibitors targeting Mpro and PLpro using in-cell-protease assay
Author / Creator:Narayanan, Anoop ; Narwal, Manju ; Majowicz, Sydney A. ; Varricchio, Carmine ; Toner, Shay A. ; Ballatore, Carlo ; Brancale, Andrea ; Murakami, Katsuhiko S. ; Jose, Joyce
Publisher:London: Nature Publishing Group UK
Journal title:Communications biology, 2022-02, Vol.5 (1), p.169-169, Article 169
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Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity
Author / Creator:Lisitskaya, Lidiya ; Shin, Yeonoh ; Agapov, Aleksei ; Olina, Anna ; Kropocheva, Ekaterina ; Ryazansky, Sergei ; Aravin, Alexei A. ; Esyunina, Daria ; Murakami, Katsuhiko S. ; Kulbachinskiy, Andrey
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-08, Vol.13 (1), p.4624-4624, Article 4624
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Structural basis of ribosomal RNA transcription regulation
Author / Creator:Shin, Yeonoh ; Qayyum, M. Zuhaib ; Pupov, Danil ; Esyunina, Daria ; Kulbachinskiy, Andrey ; Murakami, Katsuhiko S.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-01, Vol.12 (1), p.528-528, Article 528
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Molecular basis of microhomology-mediated end-joining by purified full-length Polθ
Author / Creator:Black, Samuel J. ; Ozdemir, Ahmet Y. ; Kashkina, Ekaterina ; Kent, Tatiana ; Rusanov, Timur ; Ristic, Dejan ; Shin, Yeonoh ; Suma, Antonio ; Hoang, Trung ; Chandramouly, Gurushankar ; Siddique, Labiba A. ; Borisonnik, Nikita ; Sullivan-Reed, Katherine ; Mallon, Joseph S. ; Skorski, Tomasz ; Carnevale, Vincenzo ; Murakami, Katsuhiko S. ; Wyman, Claire ; Pomerantz, Richard T.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2019-09, Vol.10 (1), p.4423-16, Article 4423
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Direct binding of TFEα opens DNA binding cleft of RNA polymerase
Author / Creator:Jun, Sung-Hoon ; Hyun, Jaekyung ; Cha, Jeong Seok ; Kim, Hoyoung ; Bartlett, Michael S. ; Cho, Hyun-Soo ; Murakami, Katsuhiko S.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-11, Vol.11 (1), p.6123-6123, Article 6123
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The X-ray crystal structure of RNA polymerase from Archaea
Author / Creator:Hirata, Akira ; Klein, Brianna J. ; Murakami, Katsuhiko S.
Publisher:London: Nature Publishing Group UK
Journal title:Nature, 2008-02, Vol.451 (7180), p.851-854
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The mechanism of the nucleo-sugar selection by multi-subunit RNA polymerases
Author / Creator:Mäkinen, Janne J. ; Shin, Yeonoh ; Vieras, Eeva ; Virta, Pasi ; Metsä-Ketelä, Mikko ; Murakami, Katsuhiko S. ; Belogurov, Georgiy A.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-02, Vol.12 (1), p.796-796, Article 796
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ArticlesPeer ReviewedFull Text
RNA polymerase and transcription elongation factor Spt4/5 complex structure
Author / Creator:Klein, Brianna J. ; Bose, Daniel ; Baker, Kevin J. ; Yusoff, Zahirah M. ; Zhang, Xiaodong ; Murakami, Katsuhiko S. ; Kornberg, Roger D.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2011-01, Vol.108 (2), p.546-550
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Author Correction: Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity
Author / Creator:Lisitskaya, Lidiya ; Shin, Yeonoh ; Agapov, Aleksei ; Olina, Anna ; Kropocheva, Ekaterina ; Ryazansky, Sergei ; Aravin, Alexei A. ; Esyunina, Daria ; Murakami, Katsuhiko S. ; Kulbachinskiy, Andrey
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-08, Vol.13 (1), p.4839-4839, Article 4839
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Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase
Author / Creator:Kouba, Tomáš ; Koval’, Tomáš ; Sudzinová, Petra ; Pospíšil, Jiří ; Brezovská, Barbora ; Hnilicová, Jarmila ; Šanderová, Hana ; Janoušková, Martina ; Šiková, Michaela ; Halada, Petr ; Sýkora, Michal ; Barvík, Ivan ; Nováček, Jiří ; Trundová, Mária ; Dušková, Jarmila ; Skálová, Tereza ; Chon, URee ; Murakami, Katsuhiko S. ; Dohnálek, Jan ; Krásný, Libor
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-12, Vol.11 (1), p.6419-6419, Article 6419
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Structural Basis of Transcription Initiation: RNA Polymerase Holoenzyme at 4 Å Resolution
Author / Creator:Murakami, Katsuhiko S. ; Masuda, Shoko ; Darst, Seth A.
Publisher:Washington, DC: American Society for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2002-05, Vol.296 (5571), p.1280-1284
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Comprehensive transcription terminator atlas for Bacillus subtilis
Author / Creator:Mandell, Zachary F. ; Vishwakarma, Rishi K. ; Yakhnin, Helen ; Murakami, Katsuhiko S. ; Kashlev, Mikhail ; Babitzke, Paul
Publisher:London: Nature Publishing Group UK
Journal title:Nature microbiology, 2022-11, Vol.7 (11), p.1918-1931
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The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration
Author / Creator:Jun, Sung-Hoon ; Hirata, Akira ; Kanai, Tamotsu ; Santangelo, Thomas J. ; Imanaka, Tadayuki ; Murakami, Katsuhiko S.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2014-10, Vol.5 (1), p.5132-5132, Article 5132
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Structural Basis of Transcription Initiation: An RNA Polymerase Holoenzyme-DNA Complex
Author / Creator:Murakami, Katsuhiko S. ; Masuda, Shoko ; Campbell, Elizabeth A. ; Muzzin, Oriana ; Darst, Seth A.
Publisher:Washington, DC: American Society for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2002-05, Vol.296 (5571), p.1285-1290
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Recent functional insights into the role of (p)ppGpp in bacterial physiology
Author / Creator:Hauryliuk, Vasili ; Atkinson, Gemma C. ; Murakami, Katsuhiko S. ; Tenson, Tanel ; Gerdes, Kenn
Publisher:London: Nature Publishing Group UK
Journal title:Nature reviews. Microbiology, 2015-05, Vol.13 (5), p.298-309
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ArticlesPeer ReviewedFull Text
Publisher Correction: Molecular basis of microhomology-mediated end-joining by purified full-length Polθ
Author / Creator:Black, Samuel J. ; Ozdemir, Ahmet Y. ; Kashkina, Ekaterina ; Kent, Tatiana ; Rusanov, Timur ; Ristic, Dejan ; Shin, Yeonoh ; Suma, Antonio ; Hoang, Trung ; Chandramouly, Gurushankar ; Siddique, Labiba A. ; Borisonnik, Nikita ; Sullivan-Reed, Katherine ; Mallon, Joseph S. ; Skorski, Tomasz ; Carnevale, Vincenzo ; Murakami, Katsuhiko S. ; Wyman, Claire ; Pomerantz, Richard T.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-04, Vol.11 (1), p.1831-1831, Article 1831
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X-ray crystal structures elucidate the nucleotidyl transfer reaction of transcript initiation using two nucleotides
Author / Creator:Gleghorn, Michael L ; Davydova, Elena K ; Basu, Ritwika ; Rothman-Denes, Lucia B ; Murakami, Katsuhiko S
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2011-03, Vol.108 (9), p.3566-3571
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X-Ray Crystal Structure of the Polymerase Domain of the Bacteriophage N4 Virion RNA Polymerase
Author / Creator:Murakami, Katsuhiko S. ; Davydova, Elena K. ; Rothman-Denes, Lucia B.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2008-04, Vol.105 (13), p.5046-5051
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Structure and function of an unusual flavodoxin from the domain Archaea
Author / Creator:Prakash, Divya ; Iyer, Prashanti R. ; Suharti, Suharti ; Walters, Karim A. ; Santiago-Martinez, Michel Geovanni ; Golbeck, John H. ; Murakami, Katsuhiko S. ; Ferry, James G.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2019-12, Vol.116 (51), p.25917-25922
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X-ray crystal structure of a reiterative transcription complex reveals an atypical RNA extension pathway
Author / Creator:Murakami, Katsuhiko S. ; Shin, Yeonoh ; Turnbough, Charles L. ; Molodtsov, Vadim
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2017-08, Vol.114 (31), p.8211-8216
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Showing 1 to 20 of 38 results

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Identification of SARS-CoV-2 inhibitors targeting Mpro and PLpro using in-cell-protease assay

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Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity

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Structural basis of ribosomal RNA transcription regulation

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Molecular basis of microhomology-mediated end-joining by purified full-length Polθ

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Direct binding of TFEα opens DNA binding cleft of RNA polymerase

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The X-ray crystal structure of RNA polymerase from Archaea

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The mechanism of the nucleo-sugar selection by multi-subunit RNA polymerases

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RNA polymerase and transcription elongation factor Spt4/5 complex structure

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Author Correction: Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity

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Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase

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Structural Basis of Transcription Initiation: RNA Polymerase Holoenzyme at 4 Å Resolution

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Comprehensive transcription terminator atlas for Bacillus subtilis

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The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration

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Structural Basis of Transcription Initiation: An RNA Polymerase Holoenzyme-DNA Complex

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Recent functional insights into the role of (p)ppGpp in bacterial physiology

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Publisher Correction: Molecular basis of microhomology-mediated end-joining by purified full-length Polθ

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X-ray crystal structures elucidate the nucleotidyl transfer reaction of transcript initiation using two nucleotides

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X-Ray Crystal Structure of the Polymerase Domain of the Bacteriophage N4 Virion RNA Polymerase

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Structure and function of an unusual flavodoxin from the domain Archaea

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X-ray crystal structure of a reiterative transcription complex reveals an atypical RNA extension pathway

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