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112 results for PacBio+Iso-Seq

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ArticlesPeer ReviewedFull Text
Reconstruction of the full-length transcriptome atlas using PacBio Iso-Seq provides insight into the alternative splicing in Gossypium australe
Author / Creator:Feng, Shouli ; Xu, Min ; Liu, Fujie ; Cui, Changjiang ; Zhou, Baoliang
Publisher:England: BioMed Central Ltd
Journal title:BMC plant biology, 2019-08, Vol.19 (1), p.365-365, Article 365
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Utilizing PacBio Iso-Seq for Novel Transcript and Gene Discovery of Abiotic Stress Responses in Oryza sativa L
Author / Creator:Schaarschmidt, Stephanie ; Fischer, Axel ; Lawas, Lovely Mae F. ; Alam, Rejbana ; Septiningsih, Endang M. ; Bailey-Serres, Julia ; Jagadish, S. V. Krishna ; Huettel, Bruno ; Hincha, Dirk K. ; Zuther, Ellen
Publisher:Switzerland: MDPI
Journal title:International journal of molecular sciences, 2020-10, Vol.21 (21), p.8148
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Alternative Splicing Regulation of Anthocyanin Biosynthesis in Camellia sinensis var. assamica Unveiled by PacBio Iso-Seq
Author / Creator:Chen, Lijiao ; Shi, Xingyun ; Nian, Bo ; Duan, Shuangmei ; Jiang, Bin ; Wang, Xinghua ; Lv, Caiyou ; Zhang, Guanghui ; Ma, Yan ; Zhao, Ming
Publisher:Oxford: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2020-08, Vol.10 (8), p.2713-2723
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Combined PacBio Iso-Seq and Illumina RNA-Seq Analysis of the Tuta absoluta (Meyrick) Transcriptome and Cytochrome P450 Genes
Author / Creator:Liu, Min ; Xiao, Feng ; Zhu, Jiayun ; Fu, Di ; Wang, Zonglin ; Xiao, Rong
Publisher:Switzerland: MDPI AG
Journal title:Insects (Basel, Switzerland), 2023-04, Vol.14 (4), p.363
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Combined PacBio Iso-Seq and Illumina RNA-Seq Analysis of the ITuta absoluta/I Transcriptome and Cytochrome P450 Genes
Author / Creator:Liu, Min ; Xiao, Feng ; Zhu, Jiayun ; Fu, Di ; Wang, Zonglin ; Xiao, Rong
Publisher:MDPI AG
Journal title:Insects (Basel, Switzerland), 2023-04, Vol.14 (4)
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The developmental dynamics of the Populus stem transcriptome
Author / Creator:Chao, Qing ; Gao, Zhi‐Fang ; Zhang, Dong ; Zhao, Biligen‐Gaowa ; Dong, Feng‐Qin ; Fu, Chun‐Xiang ; Liu, Li‐Jun ; Wang, Bai‐Chen
Publisher:England: John Wiley & Sons, Inc
Journal title:Plant biotechnology journal, 2019-01, Vol.17 (1), p.206-219
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Benchmarking sequencing methods and tools that facilitate the study of alternative polyadenylation
Author / Creator:Shah, Ankeeta ; Mittleman, Briana E. ; Gilad, Yoav ; Li, Yang I.
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2021-10, Vol.22 (1), p.291-291, Article 291
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Long-read sequencing reveals novel transcript diversity in Polypterus senegalus
Author / Creator:Shin, Jeong Woen ; Kim, Bo-Mi ; Lee, Seung Hwan ; Kim, Jun ; Rhee, Jae-Sung
Publisher:Taylor & Francis Group
Journal title:Animal cells and systems, 2025-04, p.1-10
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Gene Expression and Isoform Identification of PacBio Full-Length cDNA Sequences for Berberine Biosynthesis in Berberis koreana
Author / Creator:Roy, Neha Samir ; Choi, Ik-Young ; Um, Taeyoung ; Jeon, Mi Jin ; Kim, Bo-Yun ; Kim, Young-Dong ; Yu, Ju-Kyung ; Kim, Soonok ; Kim, Nam-Soo
Publisher:Basel: MDPI AG
Journal title:Plants (Basel), 2021-06, Vol.10 (7), p.1314
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Transcriptomic analysis of testis and epididymis tissues from Banna mini-pig inbred line boars with single-molecule long-read sequencing
Author / Creator:Wang, Pei ; Zhang, Xia ; Huo, Hailong ; Li, Weizhen ; Liu, Zhipeng ; Wang, Lina ; Li, Luogang ; Sun, Yu H. ; Huo, Jinlong
Publisher:United States: Society for the Study of Reproduction
Journal title:Biology of reproduction, 2023-03, Vol.108 (3), p.465-478
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PacBio full-length transcriptome of wild apple (Malus sieversii) provides insights into canker disease dynamic response
Author / Creator:Liu, Xiaojie ; Li, Xiaoshuang ; Wen, Xuejing ; Zhang, Yan ; Ding, Yu ; Zhang, Yiheng ; Gao, Bei ; Zhang, Daoyuan
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2021-01, Vol.22 (1), p.52-52, Article 52
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Transcriptome-wide characterization and functional analysis of Xyloglucan endo-transglycosylase/hydrolase (XTH) gene family of Salicornia europaea L. under salinity and drought stress
Author / Creator:Tiika, Richard John ; Wei, Jia ; Cui, Guangxin ; Ma, Yanjun ; Yang, Hongshan ; Duan, Huirong
Publisher:England: BioMed Central Ltd
Journal title:BMC plant biology, 2021-10, Vol.21 (1), p.491-491, Article 491
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Identification of the regulatory networks and hub genes controlling alfalfa floral pigmentation variation using RNA-sequencing analysis
Author / Creator:Duan, Hui-Rong ; Wang, Li-Rong ; Cui, Guang-Xin ; Zhou, Xue-Hui ; Duan, Xiao-Rong ; Yang, Hong-Shan
Publisher:England: BioMed Central Ltd
Journal title:BMC plant biology, 2020-03, Vol.20 (1), p.110-110, Article 110
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Identification of key genes for triacylglycerol biosynthesis and storage in herbaceous peony (Paeonia lactifolra Pall.) seeds based on full-length transcriptome
Author / Creator:Xu, Huajie ; Li, Miao ; Ma, Di ; Gao, Jiajun ; Tao, Jun ; Meng, Jiasong
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2024-06, Vol.25 (1), p.601-18, Article 601
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Unveiling the transcriptomic complexity of Miscanthus sinensis using a combination of PacBio long read- and Illumina short read sequencing platforms
Author / Creator:Wang, Yongli ; Li, Xia ; Wang, Congsheng ; Gao, Lu ; Wu, Yanfang ; Ni, Xingnan ; Sun, Jianzhong ; Jiang, Jianxiong
Publisher:London: BioMed Central Ltd
Journal title:BMC genomics, 2021-09, Vol.22 (1), p.1-690, Article 690
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A survey of transcriptome complexity using full-length isoform sequencing in the tea plant Camellia sinensis
Author / Creator:Ma, Dongna ; Fang, Jingping ; Ding, Qiansu ; Wei, Liufeng ; Li, Yiying ; Zhang, Liwen ; Zhang, Xingtan
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Molecular genetics and genomics : MGG, 2022-09, Vol.297 (5), p.1243-1255
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Characterization and Analysis of the Full-Length Transcriptomes of Multiple Organs in Pseudotaxus chienii (W.C.Cheng) W.C.Cheng
Author / Creator:Liu, Li ; Wang, Zhen ; Su, Yingjuan ; Wang, Ting
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2020-06, Vol.21 (12), p.4305
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A long-read and short-read transcriptomics approach provides the first high-quality reference transcriptome and genome annotation for Pseudotsuga menziesii (Douglas-fir)
Author / Creator:Velasco, Vera Marjorie Elauria ; Ferreira, Alyssa ; Zaman, Sumaira ; Noordermeer, Devin ; Ensminger, Ingo ; Wegrzyn, Jill L
Publisher:US: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2023-02, Vol.13 (2)
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Mitochondrial mRNA Processing in the Chlorophyte Alga Pediastrum duplex and Streptophyte Alga Chara vulgaris Reveals an Evolutionary Branch in Mitochondrial mRNA Processing
Author / Creator:Proulex, Grayson C. R. ; Meade, Marcus J. ; Manoylov, Kalina M. ; Cahoon, A. Bruce
Publisher:Switzerland: MDPI
Journal title:Plants (Basel), 2021-03, Vol.10 (3), p.576
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Transcriptome-wide identification and expression analysis of the KT/HAK/KUP family in Salicornia europaea L. under varied NaCl and KCl treatments
Author / Creator:Wei, Jia ; Tiika, Richard John ; Cui, Guangxin ; Ma, Yanjun ; Yang, Hongshan ; Duan, Huirong
Publisher:United States: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2022-03, Vol.10, p.e12989-e12989, Article e12989
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Showing 1 to 20 of 112 results

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Reconstruction of the full-length transcriptome atlas using PacBio Iso-Seq provides insight into the alternative splicing in Gossypium australe

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Utilizing PacBio Iso-Seq for Novel Transcript and Gene Discovery of Abiotic Stress Responses in Oryza sativa L

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Alternative Splicing Regulation of Anthocyanin Biosynthesis in Camellia sinensis var. assamica Unveiled by PacBio Iso-Seq

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Combined PacBio Iso-Seq and Illumina RNA-Seq Analysis of the Tuta absoluta (Meyrick) Transcriptome and Cytochrome P450 Genes

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Combined PacBio Iso-Seq and Illumina RNA-Seq Analysis of the ITuta absoluta/I Transcriptome and Cytochrome P450 Genes

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The developmental dynamics of the Populus stem transcriptome

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Benchmarking sequencing methods and tools that facilitate the study of alternative polyadenylation

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Long-read sequencing reveals novel transcript diversity in Polypterus senegalus

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Gene Expression and Isoform Identification of PacBio Full-Length cDNA Sequences for Berberine Biosynthesis in Berberis koreana

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Transcriptomic analysis of testis and epididymis tissues from Banna mini-pig inbred line boars with single-molecule long-read sequencing

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PacBio full-length transcriptome of wild apple (Malus sieversii) provides insights into canker disease dynamic response

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Transcriptome-wide characterization and functional analysis of Xyloglucan endo-transglycosylase/hydrolase (XTH) gene family of Salicornia europaea L. under salinity and drought stress

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Identification of the regulatory networks and hub genes controlling alfalfa floral pigmentation variation using RNA-sequencing analysis

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Identification of key genes for triacylglycerol biosynthesis and storage in herbaceous peony (Paeonia lactifolra Pall.) seeds based on full-length transcriptome

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Unveiling the transcriptomic complexity of Miscanthus sinensis using a combination of PacBio long read- and Illumina short read sequencing platforms

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A survey of transcriptome complexity using full-length isoform sequencing in the tea plant Camellia sinensis

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Characterization and Analysis of the Full-Length Transcriptomes of Multiple Organs in Pseudotaxus chienii (W.C.Cheng) W.C.Cheng

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A long-read and short-read transcriptomics approach provides the first high-quality reference transcriptome and genome annotation for Pseudotsuga menziesii (Douglas-fir)

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Mitochondrial mRNA Processing in the Chlorophyte Alga Pediastrum duplex and Streptophyte Alga Chara vulgaris Reveals an Evolutionary Branch in Mitochondrial mRNA Processing

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Transcriptome-wide identification and expression analysis of the KT/HAK/KUP family in Salicornia europaea L. under varied NaCl and KCl treatments

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