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Distinct stem/progenitor cells proliferate to regenerate the trachea, intrapulmonary airways and alveoli in COVID-19 patients
Author / Creator:Fang, Yinshan ; Liu, Helu ; Huang, Huachao ; Li, Haiyan ; Saqi, Anjali ; Qiang, Li ; Que, Jianwen
Publisher:Singapore: Springer Singapore
Journal title:Cell research, 2020-08, Vol.30 (8), p.705-707
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Adapting nanopore sequencing basecalling models for modification detection via incremental learning and anomaly detection
Author / Creator:Wang, Ziyuan ; Fang, Yinshan ; Liu, Ziyang ; Hao, Ning ; Zhang, Hao Helen ; Sun, Xiaoxiao ; Que, Jianwen ; Ding, Hongxu
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2024-08, Vol.15 (1), p.7148-11, Article 7148
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Interplay between Notch1 and Notch3 promotes EMT and tumor initiation in squamous cell carcinoma
Author / Creator:Natsuizaka, Mitsuteru ; Whelan, Kelly A. ; Kagawa, Shingo ; Tanaka, Koji ; Giroux, Veronique ; Chandramouleeswaran, Prasanna M. ; Long, Apple ; Sahu, Varun ; Darling, Douglas S. ; Que, Jianwen ; Yang, Yizeng ; Katz, Jonathan P. ; Wileyto, E. Paul ; Basu, Devraj ; Kita, Yoshiaki ; Natsugoe, Shoji ; Naganuma, Seiji ; Klein-Szanto, Andres J. ; Diehl, J. Alan ; Bass, Adam J. ; Wong, Kwok-Kin ; Rustgi, Anil K. ; Nakagawa, Hiroshi
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2017-11, Vol.8 (1), p.1758-16, Article 1758
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Training data diversity enhances the basecalling of novel RNA modification-induced nanopore sequencing readouts
Author / Creator:Wang, Ziyuan ; Liu, Ziyang ; Fang, Yinshan ; Zhang, Hao Helen ; Sun, Xiaoxiao ; Hao, Ning ; Que, Jianwen ; Ding, Hongxu
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2025-01, Vol.16 (1), p.679-9, Article 679
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A vasculature-resident innate lymphoid cell population in mouse lungs
Author / Creator:Shirley, Simon ; Ichise, Hiroshi ; Di Natale, Vincenzo ; Jin, Jiacheng ; Wu, Christine ; Zou, Raymond ; Zhang, Wanwei ; Fang, Yinshan ; Zhang, Yingyu ; Chen, Miao ; Peng, Sophia ; Basu, Uttiya ; Que, Jianwen ; Huang, Yuefeng
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2025-04, Vol.16 (1), p.3718-17, Article 3718
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Contribution of Trp63CreERT2-labeled cells to alveolar regeneration is independent of tuft cells
Author / Creator:Huang, Huachao ; Fang, Yinshan ; Jiang, Ming ; Zhang, Yihan ; Biermann, Jana ; Melms, Johannes C ; Danielsson, Jennifer A ; Yang, Ying ; Qiang, Li ; Liu, Jia ; Zhou, Yiwu ; Wang, Manli ; Hu, Zhihong ; Wang, Timothy C ; Saqi, Anjali ; Sun, Jie ; Matsumoto, Ichiro ; Cardoso, Wellington V ; Emala, Charles W ; Zhu, Jian ; Izar, Benjamin ; Mou, Hongmei ; Que, Jianwen
Publisher:Cambridge: eLife Sciences Publications Ltd
Journal title:eLife, 2022-09, Vol.11
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Conditional blastocyst complementation of a defective Foxa2 lineage efficiently promotes the generation of the whole lung
Author / Creator:Miura, Akihiro ; Sarmah, Hemanta ; Tanaka, Junichi ; Hwang, Youngmin ; Sawada, Anri ; Shimamura, Yuko ; Otoshi, Takehiro ; Kondo, Yuri ; Fang, Yinshan ; Shimizu, Dai ; Ninish, Zurab ; Suer, Jake Le ; Dubois, Nicole C ; Davis, Jennifer ; Toyooka, Shinichi ; Wu, Jun ; Que, Jianwen ; Hawkins, Finn J ; Lin, Chyuan-Sheng ; Mori, Munemasa
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2023-10, Vol.12
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Mesothelium Contributes to Vascular Smooth Muscle and Mesenchyme during Lung Development
Author / Creator:Que, Jianwen ; Wilm, Bettina ; Hasegawa, Hiroshi ; Wang, Fan ; Bader, David ; Hogan, Brigid L. M.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2008-10, Vol.105 (43), p.16626-16630
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Helicobacter pylori pathogen inhibits cellular responses to oncogenic stress and apoptosis
Author / Creator:Palrasu, Manikandan ; Zaika, Elena ; Paulrasu, Kodisundaram ; Caspa Gokulan, Ravindran ; Suarez, Giovanni ; Que, Jianwen ; El-Rifai, Wael ; Peek, Richard M. ; Garcia-Buitrago, Monica ; Zaika, Alexander I.
Publisher:United States: Public Library of Science
Journal title:PLoS pathogens, 2022-06, Vol.18 (6), p.e1010628
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Novel candidate genes in esophageal atresia/tracheoesophageal fistula identified by exome sequencing
Author / Creator:Wang, Jiayao ; Ahimaz, Priyanka R. ; Hashemifar, Somaye ; Khlevner, Julie ; Picoraro, Joseph A. ; Middlesworth, William ; Elfiky, Mahmoud M. ; Que, Jianwen ; Shen, Yufeng ; Chung, Wendy K.
Publisher:England: Nature Publishing Group
Journal title:European journal of human genetics : EJHG, 2021-01, Vol.29 (1), p.122-130
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APE1 redox function is required for activation of Yes-associated protein 1 under reflux conditions in Barrett’s-associated esophageal adenocarcinomas
Author / Creator:Ballout, Farah ; Lu, Heng ; Chen, Lei ; Sriramajayam, Kannappan ; Que, Jianwen ; Meng, Zhipeng ; Wang, Timothy C. ; Giordano, Silvia ; Zaika, Alexander ; McDonald, Oliver ; Peng, Dunfa ; El-Rifai, Wael
Publisher:England: BioMed Central Ltd
Journal title:Journal of experimental & clinical cancer research, 2022-09, Vol.41 (1), p.264-264, Article 264
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Role of E-cadherin in the Pathogenesis of Gastroesophageal Reflux Disease
Author / Creator:Jovov, Biljana ; Que, Jianwen ; Tobey, Nelia A ; Djukic, Zorka ; Hogan, Brigid L M ; Orlando, Roy C
Publisher:Basingstoke: Nature Publishing Group
Journal title:The American journal of gastroenterology, 2011-06, Vol.106 (6), p.1039-1047
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Autophagy mediates epithelial cytoprotection in eosinophilic oesophagitis
Author / Creator:Whelan, Kelly A ; Merves, Jamie F ; Giroux, Veronique ; Tanaka, Koji ; Guo, Andy ; Chandramouleeswaran, Prasanna M ; Benitez, Alain J ; Dods, Kara ; Que, Jianwen ; Masterson, Joanne C ; Fernando, Shahan D ; Godwin, Bridget C ; Klein-Szanto, Andres J ; Chikwava, Kudakwashe ; Ruchelli, Eduardo D ; Hamilton, Kathryn E ; Muir, Amanda B ; Wang, Mei-Lun ; Furuta, Glenn T ; Falk, Gary W ; Spergel, Jonathan M ; Nakagawa, Hiroshi
Publisher:England: BMJ Publishing Group LTD
Journal title:Gut, 2017-07, Vol.66 (7), p.1197-1207
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Disruption of respiratory epithelial basement membrane in COVID-19 patients
Author / Creator:Liu, Xue ; Fang, Yinshan ; Noble, Paul W. ; Que, Jianwen ; Jiang, Dianhua
Publisher:Singapore: Springer Singapore
Journal title:Molecular biomedicine, 2021-12, Vol.2 (1), p.8-8, Article 8
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Transcript Profiling Identifies Dynamic Gene Expression Patterns and an Important Role for Nrf2/Keap1 Pathway in the Developing Mouse Esophagus
Author / Creator:Chen, Hao ; Li, Jianying ; Li, Haiyan ; Hu, Yuhui ; Tevebaugh, Whitney ; Yamamoto, Masayuki ; Que, Jianwen ; Chen, Xiaoxin
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-05, Vol.7 (5), p.e36504
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Relationship of the Esophageal Microbiome and Tissue Gene Expression and Links to the Oral Microbiome: A Randomized Clinical Trial
Author / Creator:Annavajhala, Medini K. ; May, Michael ; Compres, Griselda ; Freedberg, Daniel E. ; Graham, Roseanna ; Stump, Stephania ; Que, Jianwen ; Korem, Tal ; Uhlemann, Anne-Catrin ; Abrams, Julian A.
Publisher:United States: Wolters Kluwer
Journal title:Clinical and translational gastroenterology, 2020-12, Vol.11 (12), p.e00235-e00235
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Activated Notch Causes Deafness by Promoting a Supporting Cell Phenotype in Developing Auditory Hair Cells
Author / Creator:Savoy-Burke, Grace ; Gilels, Felicia A. ; Pan, Wei ; Pratt, Diana ; Que, Jianwen ; Gan, Lin ; White, Patricia M. ; Kiernan, Amy E.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-09, Vol.9 (9), p.e108160-e108160
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Targeting the SOX2/CDP protein complex with a peptide suppresses the malignant progression of esophageal squamous cell carcinoma
Author / Creator:Chen, Yunyun ; Zhang, Kun ; Zhang, Rui ; Wang, Zhuo ; Yang, Liang ; Zhao, Tingting ; Zhang, Shihui ; Lin, Yong ; Zhao, Hongzhou ; Liu, Yongpan ; Wei, Yuxuan ; Zhou, Yijian ; Zhang, Jiaying ; Ye, Xianzong ; Zhao, Jing ; Li, Xinxin ; Que, Jianwen ; Shi, Songlin ; Liu, Kuancan
Publisher:London: Nature Publishing Group UK
Journal title:Cell death discovery, 2023-10, Vol.9 (1), p.399-399, Article 399
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Cyclin E involved in early stage carcinogenesis of esophageal adenocarcinoma by SNP DNA microarray and immunohistochemical studies
Author / Creator:Zhou, Zhongren ; Bandla, Santhoshi ; Ye, Jiqing ; Xia, Yinglin ; Que, Jianwen ; Luketich, James D ; Pennathur, Arjun ; Peters, Jeffrey H ; Tan, Dongfeng ; Godfrey, Tony E
Publisher:England: BioMed Central
Journal title:BMC gastroenterology, 2014-04, Vol.14 (1), p.78-78, Article 78
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Correction: Transcript Profiling Identifies Dynamic Gene Expression Patterns and an Important Role for Nrf2/Keap1 Pathway in the Developing Mouse Esophagus
Author / Creator:Chen, Hao ; Li, Jianying ; Li, Haiyan ; Hu, Yuhui ; Tevebaugh, Whitney ; Yamamoto, Masayuki ; Que, Jianwen ; Chen, Xiaoxin
Publisher:San Francisco, USA: Public Library of Science
Journal title:PloS one, 2012-05, Vol.7 (5)
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Showing 1 to 20 of 52 results

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Distinct stem/progenitor cells proliferate to regenerate the trachea, intrapulmonary airways and alveoli in COVID-19 patients

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Adapting nanopore sequencing basecalling models for modification detection via incremental learning and anomaly detection

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Interplay between Notch1 and Notch3 promotes EMT and tumor initiation in squamous cell carcinoma

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Training data diversity enhances the basecalling of novel RNA modification-induced nanopore sequencing readouts

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A vasculature-resident innate lymphoid cell population in mouse lungs

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Contribution of Trp63CreERT2-labeled cells to alveolar regeneration is independent of tuft cells

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Conditional blastocyst complementation of a defective Foxa2 lineage efficiently promotes the generation of the whole lung

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Mesothelium Contributes to Vascular Smooth Muscle and Mesenchyme during Lung Development

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Helicobacter pylori pathogen inhibits cellular responses to oncogenic stress and apoptosis

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Novel candidate genes in esophageal atresia/tracheoesophageal fistula identified by exome sequencing

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APE1 redox function is required for activation of Yes-associated protein 1 under reflux conditions in Barrett’s-associated esophageal adenocarcinomas

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Role of E-cadherin in the Pathogenesis of Gastroesophageal Reflux Disease

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Autophagy mediates epithelial cytoprotection in eosinophilic oesophagitis

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Disruption of respiratory epithelial basement membrane in COVID-19 patients

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Transcript Profiling Identifies Dynamic Gene Expression Patterns and an Important Role for Nrf2/Keap1 Pathway in the Developing Mouse Esophagus

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Relationship of the Esophageal Microbiome and Tissue Gene Expression and Links to the Oral Microbiome: A Randomized Clinical Trial

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Activated Notch Causes Deafness by Promoting a Supporting Cell Phenotype in Developing Auditory Hair Cells

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Targeting the SOX2/CDP protein complex with a peptide suppresses the malignant progression of esophageal squamous cell carcinoma

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Cyclin E involved in early stage carcinogenesis of esophageal adenocarcinoma by SNP DNA microarray and immunohistochemical studies

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Correction: Transcript Profiling Identifies Dynamic Gene Expression Patterns and an Important Role for Nrf2/Keap1 Pathway in the Developing Mouse Esophagus

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