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ArticlesPeer ReviewedFull Text
A game theory model for gut bacterial nutrient utilization strategies during human infancy
Author / Creator:Angell, Inga Leena ; Rudi, Knut
Publisher:England: The Royal Society
Journal title:Proceedings of the Royal Society. B, Biological sciences, 2020-07, Vol.287 (1931), p.20200824-20200824
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Relationships of gut microbiota, short-chain fatty acids, inflammation, and the gut barrier in Parkinson’s disease
Author / Creator:Aho, Velma T. E. ; Houser, Madelyn C. ; Pereira, Pedro A. B. ; Chang, Jianjun ; Rudi, Knut ; Paulin, Lars ; Hertzberg, Vicki ; Auvinen, Petri ; Tansey, Malú G. ; Scheperjans, Filip
Publisher:England: BioMed Central Ltd
Journal title:Molecular neurodegeneration, 2021-02, Vol.16 (1), p.6-6, Article 6
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HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data
Author / Creator:Hiseni, Pranvera ; Rudi, Knut ; Wilson, Robert C. ; Hegge, Finn Terje ; Snipen, Lars
Publisher:London: BioMed Central
Journal title:Microbiome, 2021-07, Vol.9 (1), p.1-12, Article 165
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Metagenome-mining indicates an association between bacteriocin presence and strain diversity in the infant gut
Author / Creator:Ormaasen, Ida ; Rudi, Knut ; Diep, Dzung B. ; Snipen, Lars
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2023-05, Vol.24 (1), p.295-12, Article 295
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Early gut mycobiota and mother-offspring transfer
Author / Creator:Schei, Kasper ; Avershina, Ekaterina ; Øien, Torbjørn ; Rudi, Knut ; Follestad, Turid ; Salamati, Saideh ; Ødegård, Rønnaug Astri
Publisher:England: BioMed Central Ltd
Journal title:Microbiome, 2017-08, Vol.5 (1), p.107-107, Article 107
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Lysates of Methylococcus capsulatus Bath induce a lean-like microbiota, intestinal FoxP3+RORγt+IL-17+ Tregs and improve metabolism
Author / Creator:Jensen, Benjamin A. H. ; Holm, Jacob B. ; Larsen, Ida S. ; von Burg, Nicole ; Derer, Stefanie ; Sonne, Si B. ; Pærregaard, Simone I. ; Damgaard, Mads V. ; Indrelid, Stine A. ; Rivollier, Aymeric ; Agrinier, Anne-Laure ; Sulek, Karolina ; Arnoldussen, Yke J. ; Fjære, Even ; Marette, André ; Angell, Inga L. ; Rudi, Knut ; Treebak, Jonas T. ; Madsen, Lise ; Åkesson, Caroline Piercey ; Agace, William ; Sina, Christian ; Kleiveland, Charlotte R. ; Kristiansen, Karsten ; Lea, Tor E.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-02, Vol.12 (1), p.1093-19, Article 1093
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ArticlesPeer ReviewedFull Text
METASEED: a novel approach to full-length 16S rRNA gene reconstruction from short read data
Author / Creator:Philip, Melcy ; Rudi, Knut ; Ormaasen, Ida ; Angell, Inga Leena ; Pettersen, Ragnhild ; Keeley, Nigel B. ; Snipen, Lars-Gustav
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2024-07, Vol.25 (1), p.237-16, Article 237
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Mud volcanoes and the presence of PAHs
Author / Creator:Remizovschi, Alexei ; Carpa, Rahela ; Forray, Ferenc L. ; Chiriac, Cecilia ; Roba, Carmen-Andreea ; Beldean-Galea, Simion ; Andrei, Adrian-Ștefan ; Szekeres, Edina ; Baricz, Andreea ; Lupan, Iulia ; Rudi, Knut ; Coman, Cristian
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-01, Vol.10 (1), p.1253-1253, Article 1253
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Experimental support for multidrug resistance transfer potential in the preterm infant gut microbiota
Author / Creator:Hagbø, Mari ; Ravi, Anuradha ; Angell, Inga Leena ; Sunde, Marianne ; Ludvigsen, Jane ; Diep, Dzung B. ; Foley, Steven L. ; Vento, Maximo ; Collado, Maria Carmen ; Perez-Martinez, Gaspar ; Rudi, Knut
Publisher:New York: Nature Publishing Group US
Journal title:Pediatric research, 2020-07, Vol.88 (1), p.57-65
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Spatiotemporal succession of phosphorous accumulating biofilms during the first year of establishment
Author / Creator:Villard, Didrik ; Nesbø Goa, Inger Andrea ; Leena Angell, Inga ; Eikaas, Sondre ; Saltnes, Torgeir ; Johansen, Wenche ; Rudi, Knut
Publisher:England: IWA Publishing
Journal title:Water science and technology, 2023-07, Vol.88 (2), p.381-391
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Convergent temporal dynamics of the human infant gut microbiota
Author / Creator:Trosvik, Pål ; Stenseth, Nils Christian ; Rudi, Knut
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2010-02, Vol.4 (2), p.151-158
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Association between diet and rumen microbiota in wild roe deer
Author / Creator:Wilson, Robert ; Østbye, Kjartan ; Angell, Inga Leena ; Rudi, Knut
Publisher:England: Oxford University Press
Journal title:FEMS microbiology letters, 2019-03, Vol.366 (6), p.1
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Transmission and persistence of IncF conjugative plasmids in the gut microbiota of full-term infants
Author / Creator:Ravi, Anuradha ; Valdés-Varela, Lorena ; Gueimonde, Miguel ; Rudi, Knut
Publisher:England: Oxford University Press
Journal title:FEMS microbiology ecology, 2018-01, Vol.94 (1), p.1
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Detection and Characterization of Streptomycin Resistance (strA-strB) in a Honeybee Gut Symbiont (Snodgrassella alvi) and the Associated Risk of Antibiotic Resistance Transfer
Author / Creator:Ludvigsen, Jane ; Amdam, Gro V. ; Rudi, Knut ; L’Abée-Lund, Trine M.
Publisher:New York: Springer Science + Business Media
Journal title:Microbial ecology, 2018-10, Vol.76 (3), p.588-591
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Culture dependent and independent analyses suggest a low level of sharing of endospore-forming species between mothers and their children
Author / Creator:Avershina, Ekaterina ; Larsen, Marte Gro ; Aspholm, Marina ; Lindback, Toril ; Storrø, Ola ; Øien, Torbjørn ; Johnsen, Roar ; Rudi, Knut
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-02, Vol.10 (1), p.1832, Article 1832
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Unveiling an abundant core microbiota in the human adult colon by a phylogroup-independent searching approach
Author / Creator:Sekelja, Monika ; Berget, Ingunn ; Næs, Tormod ; Rudi, Knut
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2011-03, Vol.5 (3), p.519-531
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Reduced metagenome sequencing for strain-resolution taxonomic profiles
Author / Creator:Snipen, Lars ; Angell, Inga-Leena ; Rognes, Torbjørn ; Rudi, Knut
Publisher:England: BioMed Central
Journal title:Microbiome, 2021-03, Vol.9 (1), p.79-79, Article 79
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Rumen microbiota for wild boreal cervids living in the same habitat
Author / Creator:Østbye, Kjartan ; Wilson, Robert ; Rudi, Knut
Publisher:England: Oxford University Press
Journal title:FEMS microbiology letters, 2016-10, Vol.363 (20), p.fnw233
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Effects of fructan and gluten on gut microbiota in individuals with self-reported non-celiac gluten/wheat sensitivity—a randomised controlled crossover trial
Author / Creator:Herfindal, Anne Mari ; Nilsen, Morten ; Aspholm, Trude E. ; Schultz, Gry I. G. ; Valeur, Jørgen ; Rudi, Knut ; Thoresen, Magne ; Lundin, Knut E. A. ; Henriksen, Christine ; Bøhn, Siv K.
Publisher:England: BioMed Central Ltd
Journal title:BMC medicine, 2024-09, Vol.22 (1), p.358-19, Article 358
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A diet change from dry food to beef induces reversible changes on the faecal microbiota in healthy, adult client-owned dogs
Author / Creator:Herstad, Kristin M. V. ; Gajardo, Karina ; Bakke, Anne Marie ; Moe, Lars ; Ludvigsen, Jane ; Rudi, Knut ; Rud, Ida ; Sekelja, Monika ; Skancke, Ellen
Publisher:England: BioMed Central
Journal title:BMC veterinary research, 2017-05, Vol.13 (1), p.147-147, Article 147
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Showing 1 to 20 of 105 results

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A game theory model for gut bacterial nutrient utilization strategies during human infancy

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Relationships of gut microbiota, short-chain fatty acids, inflammation, and the gut barrier in Parkinson’s disease

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HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data

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Metagenome-mining indicates an association between bacteriocin presence and strain diversity in the infant gut

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Early gut mycobiota and mother-offspring transfer

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Lysates of Methylococcus capsulatus Bath induce a lean-like microbiota, intestinal FoxP3+RORγt+IL-17+ Tregs and improve metabolism

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METASEED: a novel approach to full-length 16S rRNA gene reconstruction from short read data

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Mud volcanoes and the presence of PAHs

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Experimental support for multidrug resistance transfer potential in the preterm infant gut microbiota

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Spatiotemporal succession of phosphorous accumulating biofilms during the first year of establishment

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Convergent temporal dynamics of the human infant gut microbiota

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Association between diet and rumen microbiota in wild roe deer

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Transmission and persistence of IncF conjugative plasmids in the gut microbiota of full-term infants

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Detection and Characterization of Streptomycin Resistance (strA-strB) in a Honeybee Gut Symbiont (Snodgrassella alvi) and the Associated Risk of Antibiotic Resistance Transfer

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Culture dependent and independent analyses suggest a low level of sharing of endospore-forming species between mothers and their children

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Unveiling an abundant core microbiota in the human adult colon by a phylogroup-independent searching approach

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Reduced metagenome sequencing for strain-resolution taxonomic profiles

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Rumen microbiota for wild boreal cervids living in the same habitat

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Effects of fructan and gluten on gut microbiota in individuals with self-reported non-celiac gluten/wheat sensitivity—a randomised controlled crossover trial

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A diet change from dry food to beef induces reversible changes on the faecal microbiota in healthy, adult client-owned dogs

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