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ArticlesPeer ReviewedFull Text
A large-scale genomically predicted protein mass database enables rapid and broad-spectrum identification of bacterial and archaeal isolates by mass spectrometry
Author / Creator:Sekiguchi, Yuji ; Teramoto, Kanae ; Tourlousse, Dieter M. ; Ohashi, Akiko ; Hamajima, Mayu ; Miura, Daisuke ; Yamada, Yoshihiro ; Iwamoto, Shinichi ; Tanaka, Koichi
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2023-12, Vol.24 (1), p.257-257, Article 257
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Sample tracking in microbiome community profiling assays using synthetic 16S rRNA gene spike-in controls
Author / Creator:Tourlousse, Dieter M. ; Ohashi, Akiko ; Sekiguchi, Yuji
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2018-06, Vol.8 (1), p.9095-9, Article 9095
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Identification of Mycobacterium abscessus using the peaks of ribosomal protein L29, L30 and hemophore-related protein by MALDI-MS proteotyping
Author / Creator:Takei, Satomi ; Teramoto, Kanae ; Sekiguchi, Yuji ; Ihara, Hiroaki ; Tohya, Mari ; Iwamoto, Shinichi ; Tanaka, Koichi ; Khasawneh, Abdullah ; Horiuchi, Yuki ; Misawa, Shigeki ; Naito, Toshio ; Kirikae, Teruo ; Tada, Tatsuya ; Tabe, Yoko
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2024-05, Vol.14 (1), p.11187-11, Article 11187
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Sulphur metabolism in colon cancer tissues: a case report and literature review
Author / Creator:Fukuoka, Hironori ; Andou, Tomohiro ; Moriya, Takeo ; Narita, Koji ; Kasahara, Ken ; Miura, Daisuke ; Sekiguchi, Yuji ; Suzuki, Shinsuke ; Nakagawa, Kazuya ; Ozawa, Mayumi ; Ishibe, Atsushi ; Endo, Itaru
Publisher:London, England: SAGE Publications
Journal title:Journal of international medical research, 2021-11, Vol.49 (11), p.3000605211059936-3000605211059936
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ArticlesPeer ReviewedFull Text
Characterization of MazF-Mediated Sequence-Specific RNA Cleavage in Pseudomonas putida Using Massive Parallel Sequencing
Author / Creator:Miyamoto, Tatsuki ; Kato, Yuka ; Sekiguchi, Yuji ; Tsuneda, Satoshi ; Noda, Naohiro
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-02, Vol.11 (2), p.e0149494-e0149494
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Validation and standardization of DNA extraction and library construction methods for metagenomics-based human fecal microbiome measurements
Author / Creator:Tourlousse, Dieter M. ; Narita, Koji ; Miura, Takamasa ; Sakamoto, Mitsuo ; Ohashi, Akiko ; Shiina, Keita ; Matsuda, Masami ; Miura, Daisuke ; Shimamura, Mamiko ; Ohyama, Yoshifumi ; Yamazoe, Atsushi ; Uchino, Yoshihito ; Kameyama, Keishi ; Arioka, Shingo ; Kataoka, Jiro ; Hisada, Takayoshi ; Fujii, Kazuyuki ; Takahashi, Shunsuke ; Kuroiwa, Miho ; Rokushima, Masatomo ; Nishiyama, Mitsue ; Tanaka, Yoshiki ; Fuchikami, Takuya ; Aoki, Hitomi ; Kira, Satoshi ; Koyanagi, Ryo ; Naito, Takeshi ; Nishiwaki, Morie ; Kumagai, Hirotaka ; Konda, Mikiko ; Kasahara, Ken ; Ohkuma, Moriya ; Kawasaki, Hiroko ; Sekiguchi, Yuji ; Terauchi, Jun
Publisher:England: BioMed Central
Journal title:Microbiome, 2021-04, Vol.9 (1), p.95-95, Article 95
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Functionally Stable and Phylogenetically Diverse Microbial Enrichments from Microbial Fuel Cells during Wastewater Treatment
Author / Creator:Ishii, Shun'ichi ; Suzuki, Shino ; Norden-Krichmar, Trina M. ; Nealson, Kenneth H. ; Sekiguchi, Yuji ; Gorby, Yuri A. ; Bretschger, Orianna
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-02, Vol.7 (2), p.e30495
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Diversity and geochemical community assembly processes of the living rare biosphere in a sand-and-gravel aquifer ecosystem in the Midwestern United States
Author / Creator:Yamamoto, Kyosuke ; Hackley, Keith C. ; Kelly, Walton R. ; Panno, Samuel V. ; Sekiguchi, Yuji ; Sanford, Robert A. ; Liu, Wen-Tso ; Kamagata, Yoichi ; Tamaki, Hideyuki
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-09, Vol.9 (1), p.13484-11, Article 13484
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ArticlesPeer ReviewedFull Text
First genomic insights into members of a candidate bacterial phylum responsible for wastewater bulking
Author / Creator:Sekiguchi, Yuji ; Ohashi, Akiko ; Parks, Donovan H. ; Yamauchi, Toshihiro ; Tyson, Gene W. ; Hugenholtz, Philip
Publisher:United States: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2015-01, Vol.3, p.e740-e740
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Oligonucleotide primers, probes and molecular methods for the environmental monitoring of methanogenic archaea
Author / Creator:Narihiro, Takashi ; Sekiguchi, Yuji
Publisher:Oxford, UK: Blackwell Publishing Ltd
Journal title:Microbial biotechnology, 2011-09, Vol.4 (5), p.585-602
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ArticlesPeer ReviewedFull Text
Enhanced electrode-reducing rate during the enrichment process in an air-cathode microbial fuel cell
Author / Creator:Ishii, Shun’ichi ; Logan, Bruce E. ; Sekiguchi, Yuji
Publisher:Berlin/Heidelberg: Springer-Verlag
Journal title:Applied microbiology and biotechnology, 2012-05, Vol.94 (4), p.1087-1094
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Development of certified reference material NMIJ CRM 6205-a for the validation of DNA quantification methods: accurate mass concentrations of 600-bp DNA solutions having artificial sequences
Author / Creator:Shibayama, Sachie ; Fujii, Shin-ichiro ; Inagaki, Kazumi ; Yamazaki, Taichi ; Yoshioka, Mariko ; Matsukura, Satoko ; Sasaki, Akira ; Suyama, Tetsushi ; Noda, Naohiro ; Sekiguchi, Yuji ; Takatsu, Akiko
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Analytical and bioanalytical chemistry, 2019-09, Vol.411 (23), p.6091-6100
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ArticlesPeer ReviewedFull Text
JAK2V617F mutation status and allele burden in classical Ph-negative myeloproliferative neoplasms in Japan
Author / Creator:Edahiro, Yoko ; Morishita, Soji ; Takahashi, Kochi ; Hironaka, Yumi ; Yahata, Yuriko ; Sunami, Yoshitaka ; Shirane, Shuichi ; Tsutsui, Miyuki ; Noguchi, Masaaki ; Koike, Michiaki ; Imai, Kiyotoshi ; Kirito, Keita ; Noda, Naohiro ; Sekiguchi, Yuji ; Tsuneda, Satoshi ; Ohsaka, Akimichi ; Araki, Marito ; Komatsu, Norio
Publisher:Tokyo: Springer Japan
Journal title:International journal of hematology, 2014-05, Vol.99 (5), p.625-634
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Quantitative detection of human enteric adenoviruses in river water by microfluidic digital polymerase chain reaction
Author / Creator:Kishida, Naohiro ; Noda, Naohiro ; Haramoto, Eiji ; Kawaharasaki, Mamoru ; Akiba, Michihiro ; Sekiguchi, Yuji
Publisher:London: International Water Association
Journal title:Water science and technology, 2014-01, Vol.70 (3), p.555-560
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Identification of Hydroxyanthraquinones as Novel Inhibitors of Hepatitis C Virus NS3 Helicase
Author / Creator:Furuta, Atsushi ; Tsubuki, Masayoshi ; Endoh, Miduki ; Miyamoto, Tatsuki ; Tanaka, Junichi ; Salam, Kazi ; Akimitsu, Nobuyoshi ; Tani, Hidenori ; Yamashita, Atsuya ; Moriishi, Kohji ; Nakakoshi, Masamichi ; Sekiguchi, Yuji ; Tsuneda, Satoshi ; Noda, Naohiro
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2015-08, Vol.16 (8), p.18439-18453
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Detection of MPLW515L/K Mutations and Determination of Allele Frequencies with a Single-Tube PCR Assay
Author / Creator:Takei, Hiraku ; Morishita, Soji ; Araki, Marito ; Edahiro, Yoko ; Sunami, Yoshitaka ; Hironaka, Yumi ; Noda, Naohiro ; Sekiguchi, Yuji ; Tsuneda, Satoshi ; Ohsaka, Akimichi ; Komatsu, Norio
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-08, Vol.9 (8), p.e104958-e104958
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Multi-Omics Analysis to Generate Hypotheses for Mild Health Problems in Monkeys
Author / Creator:Hamano, Fumie ; Tokuoka, Suzumi M. ; Ishibashi, Megumi ; Yokoi, Yasuto ; Tourlousse, Dieter M. ; Kita, Yoshihiro ; Sekiguchi, Yuji ; Yasui, Hiroyuki ; Shimizu, Takao ; Oda, Yoshiya
Publisher:Basel: MDPI AG
Journal title:Metabolites, 2021-10, Vol.11 (10), p.701
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ArticlesPeer ReviewedFull Text
Draft Genome Sequence of the Syntrophic Lactate-Degrading Bacterium Tepidanaerobacter syntrophicus JLT
Author / Creator:Matsuura Norihisa ; Ohashi Akiko ; Tourlousse, Dieter M ; Sekiguchi Yuji
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-02, Vol.4 (1)
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Draft Genome Sequence of Terrimicrobium sacchariphilum NM-5T, a Facultative Anaerobic Soil Bacterium of the Class Spartobacteria
Author / Creator:Yan-Ling, Qiu ; Tourlousse, Dieter M ; Matsuura Norihisa ; Ohashi Akiko ; Sekiguchi Yuji
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2017-07, Vol.5 (30)
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Draft Genome Sequence of Thermodesulfovibrio aggregans TGE-P1T, an Obligately Anaerobic, Thermophilic, Sulfate-Reducing Bacterium in the Phylum Nitrospirae
Author / Creator:Matsuura Norihisa ; Ohashi Akiko ; Tourlousse, Dieter M ; Sekiguchi Yuji
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-03, Vol.4 (2)
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Showing 1 to 20 of 48 results

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A large-scale genomically predicted protein mass database enables rapid and broad-spectrum identification of bacterial and archaeal isolates by mass spectrometry

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Sample tracking in microbiome community profiling assays using synthetic 16S rRNA gene spike-in controls

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Identification of Mycobacterium abscessus using the peaks of ribosomal protein L29, L30 and hemophore-related protein by MALDI-MS proteotyping

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Sulphur metabolism in colon cancer tissues: a case report and literature review

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Characterization of MazF-Mediated Sequence-Specific RNA Cleavage in Pseudomonas putida Using Massive Parallel Sequencing

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Validation and standardization of DNA extraction and library construction methods for metagenomics-based human fecal microbiome measurements

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Functionally Stable and Phylogenetically Diverse Microbial Enrichments from Microbial Fuel Cells during Wastewater Treatment

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Diversity and geochemical community assembly processes of the living rare biosphere in a sand-and-gravel aquifer ecosystem in the Midwestern United States

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First genomic insights into members of a candidate bacterial phylum responsible for wastewater bulking

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Oligonucleotide primers, probes and molecular methods for the environmental monitoring of methanogenic archaea

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Enhanced electrode-reducing rate during the enrichment process in an air-cathode microbial fuel cell

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Development of certified reference material NMIJ CRM 6205-a for the validation of DNA quantification methods: accurate mass concentrations of 600-bp DNA solutions having artificial sequences

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JAK2V617F mutation status and allele burden in classical Ph-negative myeloproliferative neoplasms in Japan

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Quantitative detection of human enteric adenoviruses in river water by microfluidic digital polymerase chain reaction

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Identification of Hydroxyanthraquinones as Novel Inhibitors of Hepatitis C Virus NS3 Helicase

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Detection of MPLW515L/K Mutations and Determination of Allele Frequencies with a Single-Tube PCR Assay

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Multi-Omics Analysis to Generate Hypotheses for Mild Health Problems in Monkeys

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Draft Genome Sequence of the Syntrophic Lactate-Degrading Bacterium Tepidanaerobacter syntrophicus JLT

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Draft Genome Sequence of Terrimicrobium sacchariphilum NM-5T, a Facultative Anaerobic Soil Bacterium of the Class Spartobacteria

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Draft Genome Sequence of Thermodesulfovibrio aggregans TGE-P1T, an Obligately Anaerobic, Thermophilic, Sulfate-Reducing Bacterium in the Phylum Nitrospirae

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