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ArticlesPeer ReviewedFull Text
SLPI is a critical mediator that controls PTH-induced bone formation
Author / Creator:Morimoto, Akito ; Kikuta, Junichi ; Nishikawa, Keizo ; Sudo, Takao ; Uenaka, Maki ; Furuya, Masayuki ; Hasegawa, Tetsuo ; Hashimoto, Kunihiko ; Tsukazaki, Hiroyuki ; Seno, Shigeto ; Nakamura, Akira ; Okuzaki, Daisuke ; Sugihara, Fuminori ; Ninomiya, Akinori ; Yoshimura, Takeshi ; Takao-Kawabata, Ryoko ; Matsuda, Hideo ; Ishii, Masaru
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-04, Vol.12 (1), p.2136-14, Article 2136
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Development of an intravital imaging system for the synovial tissue reveals the dynamics of CTLA-4 Ig in vivo
Author / Creator:Hasegawa, Tetsuo ; Kikuta, Junichi ; Sudo, Takao ; Yamashita, Erika ; Seno, Shigeto ; Takeuchi, Tsutomu ; Ishii, Masaru
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-08, Vol.10 (1), p.13480-13480, Article 13480
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Quantifying the recovery process of skeletal muscle on hematoxylin and eosin stained images via learning from label proportion
Author / Creator:Yamaoka, Yu ; Chan, Weng Ian ; Seno, Shigeto ; Iwamori, Kanako ; Fukada, So-ichiro ; Matsuda, Hideo
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2024-11, Vol.14 (1), p.27044-14, Article 27044
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Direct cell–cell contact between mature osteoblasts and osteoclasts dynamically controls their functions in vivo
Author / Creator:Furuya, Masayuki ; Kikuta, Junichi ; Fujimori, Sayumi ; Seno, Shigeto ; Maeda, Hiroki ; Shirazaki, Mai ; Uenaka, Maki ; Mizuno, Hiroki ; Iwamoto, Yoriko ; Morimoto, Akito ; Hashimoto, Kunihiko ; Ito, Takeshi ; Isogai, Yukihiro ; Kashii, Masafumi ; Kaito, Takashi ; Ohba, Shinsuke ; Chung, Ung-il ; Lichtler, Alexander C. ; Kikuchi, Kazuya ; Matsuda, Hideo ; Yoshikawa, Hideki ; Ishii, Masaru
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2018-01, Vol.9 (1), p.300-12, Article 300
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In vivo dynamic analysis of BMP-2-induced ectopic bone formation
Author / Creator:Hashimoto, Kunihiko ; Kaito, Takashi ; Furuya, Masayuki ; Seno, Shigeto ; Okuzaki, Daisuke ; Kikuta, Junichi ; Tsukazaki, Hiroyuki ; Matsuda, Hideo ; Yoshikawa, Hideki ; Ishii, Masaru
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-03, Vol.10 (1), p.4751, Article 4751
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Biodiversity and Constrained Information Dynamics in Ecosystems: A Framework for Living Systems
Author / Creator:Hosoda, Kazufumi ; Seno, Shigeto ; Kamiura, Rikuto ; Murakami, Naomi ; Kondoh, Michio
Publisher:Switzerland: MDPI AG
Journal title:Entropy (Basel, Switzerland), 2023-12, Vol.25 (12), p.1624
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A single fast Hebbian-like process enabling one-shot class addition in deep neural networks without backbone modification
Author / Creator:Hosoda, Kazufumi ; Nishida, Keigo ; Seno, Shigeto ; Mashita, Tomohiro ; Kashioka, Hideki ; Ohzawa, Izumi
Publisher:Switzerland: Frontiers Media S.A
Journal title:Frontiers in neuroscience, 2024-06, Vol.18, p.1344114
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Development of clinical phenotypes and biological profiles via proteomic analysis of trauma patients
Author / Creator:Tachino, Jotaro ; Matsumoto, Hisatake ; Sugihara, Fuminori ; Seno, Shigeto ; Okuzaki, Daisuke ; Kitamura, Tetsuhisa ; Komukai, Sho ; Kido, Yoshiyuki ; Kojima, Takashi ; Togami, Yuki ; Katayama, Yusuke ; Nakagawa, Yuko ; Ogura, Hiroshi
Publisher:London: BioMed Central Ltd
Journal title:Critical care (London, England), 2022-08, Vol.26 (1), p.1-241, Article 241
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SC-JNMF: single-cell clustering integrating multiple quantification methods based on joint non-negative matrix factorization
Author / Creator:Shiga, Mikio ; Seno, Shigeto ; Onizuka, Makoto ; Matsuda, Hideo
Publisher:San Diego, USA: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2021-08, Vol.9, p.e12087-e12087, Article e12087
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Automated transition analysis of activated gene regulation during diauxic nutrient shift in Escherichia coli and adipocyte differentiation in mouse cells
Author / Creator:Takenaka, Yoichi ; Mikami, Kazuma ; Seno, Shigeto ; Matsuda, Hideo
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2018-05, Vol.19 (Suppl 4), p.89-89, Article 89
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Myeloid cell-specific ablation of Runx2 gene exacerbates post-infarct cardiac remodeling
Author / Creator:Tomimatsu, Masashi ; Matsumoto, Kotaro ; Ashizuka, Moe ; Kumagai, Shohei ; Tanaka, Shota ; Nakae, Takafumi ; Yokota, Kosei ; Kominami, Shunsuke ; Kajiura, Ryota ; Okuzaki, Daisuke ; Motooka, Daisuke ; Shiraishi, Aki ; Abe, Takaya ; Matsuda, Hideo ; Okada, Yoshiaki ; Maeda, Makiko ; Seno, Shigeto ; Obana, Masanori ; Fujio, Yasushi
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-10, Vol.12 (1), p.16656-16656, Article 16656
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Evolutionary Consequence of a Trade-Off between Growth and Maintenance along with Ribosomal Damages
Author / Creator:Ying, Bei-Wen ; Honda, Tomoya ; Tsuru, Saburo ; Seno, Shigeto ; Matsuda, Hideo ; Kazuta, Yasuaki ; Yomo, Tetsuya
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-08, Vol.10 (8), p.e0135639-e0135639
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Roles of Enhancer RNAs in RANKL-induced Osteoclast Differentiation Identified by Genome-wide Cap-analysis of Gene Expression using CRISPR/Cas9
Author / Creator:Sakaguchi, Yukako ; Nishikawa, Keizo ; Seno, Shigeto ; Matsuda, Hideo ; Takayanagi, Hiroshi ; Ishii, Masaru
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2018-05, Vol.8 (1), p.7504-11, Article 7504
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Multilevel comparative analysis of the contributions of genome reduction and heat shock to the Escherichia coli transcriptome
Author / Creator:Ying, Bei-Wen ; Seno, Shigeto ; Kaneko, Fuyuro ; Matsuda, Hideo ; Yomo, Tetsuya
Publisher:England: BioMed Central
Journal title:BMC genomics, 2013-01, Vol.14 (1), p.25-25
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Migration arrest of chemoresistant leukemia cells mediated by MRTF-SRF pathway
Author / Creator:Morimatsu, Maho ; Yamashita, Erika ; Seno, Shigeto ; Sudo, Takao ; Kikuta, Junichi ; Mizuno, Hiroki ; Okuzaki, Daisuke ; Motooka, Daisuke ; Ishii, Masaru
Publisher:England: BioMed Central
Journal title:Inflammation and regeneration, 2020-07, Vol.40, p.15-15
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Directed evolution of cell size in Escherichia coli
Author / Creator:Yoshida, Mari ; Tsuru, Saburo ; Hirata, Naoko ; Seno, Shigeto ; Matsuda, Hideo ; Ying, Bei-Wen ; Yomo, Tetsuya
Publisher:England: BioMed Central Ltd
Journal title:BMC evolutionary biology, 2014-12, Vol.14 (1), p.257-257, Article 257
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An estimation method for inference of gene regulatory net-work using Bayesian network with uniting of partial problems
Author / Creator:Watanabe, Yukito ; Seno, Shigeto ; Takenaka, Yoichi ; Matsuda, Hideo
Publisher:England: BioMed Central
Journal title:BMC genomics, 2012, Vol.13 Suppl 1 (Suppl 1), p.S12-S12
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The dipeptidyl peptidase‐4 (DPP‐4) inhibitor teneligliptin enhances brown adipose tissue function, thereby preventing obesity in mice
Author / Creator:Takeda, Kenichiro ; Sawazaki, Honami ; Takahashi, Haruya ; Yeh, Yu‐Sheng ; Jheng, Huei‐Fen ; Nomura, Wataru ; Ara, Takeshi ; Takahashi, Nobuyuki ; Seno, Shigeto ; Osato, Naoki ; Matsuda, Hideo ; Kawada, Teruo ; Goto, Tsuyoshi
Publisher:England: John Wiley & Sons, Inc
Journal title:FEBS open bio, 2018-11, Vol.8 (11), p.1782-1793
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Metagenome fragment classification based on multiple motif-occurrence profiles
Author / Creator:Matsushita, Naoki ; Seno, Shigeto ; Takenaka, Yoichi ; Matsuda, Hideo
Publisher:United States: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2014-09, Vol.2, p.e559-e559
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Multilevel comparative analysis of the contributions of genome reduction and heat shock to the Escherichia colitranscriptome
Author / Creator:Ying, Bei-Wen ; Seno, Shigeto ; Kaneko, Fuyuro ; Matsuda, Hideo ; Yomo, Tetsuya
Publisher:BioMed Central Ltd
Journal title:BMC genomics, 2013-01, Vol.14 (1), Article 25
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SLPI is a critical mediator that controls PTH-induced bone formation

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Development of an intravital imaging system for the synovial tissue reveals the dynamics of CTLA-4 Ig in vivo

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Quantifying the recovery process of skeletal muscle on hematoxylin and eosin stained images via learning from label proportion

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Direct cell–cell contact between mature osteoblasts and osteoclasts dynamically controls their functions in vivo

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In vivo dynamic analysis of BMP-2-induced ectopic bone formation

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Biodiversity and Constrained Information Dynamics in Ecosystems: A Framework for Living Systems

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A single fast Hebbian-like process enabling one-shot class addition in deep neural networks without backbone modification

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Development of clinical phenotypes and biological profiles via proteomic analysis of trauma patients

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SC-JNMF: single-cell clustering integrating multiple quantification methods based on joint non-negative matrix factorization

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Automated transition analysis of activated gene regulation during diauxic nutrient shift in Escherichia coli and adipocyte differentiation in mouse cells

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Myeloid cell-specific ablation of Runx2 gene exacerbates post-infarct cardiac remodeling

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Evolutionary Consequence of a Trade-Off between Growth and Maintenance along with Ribosomal Damages

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Roles of Enhancer RNAs in RANKL-induced Osteoclast Differentiation Identified by Genome-wide Cap-analysis of Gene Expression using CRISPR/Cas9

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Multilevel comparative analysis of the contributions of genome reduction and heat shock to the Escherichia coli transcriptome

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Migration arrest of chemoresistant leukemia cells mediated by MRTF-SRF pathway

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Directed evolution of cell size in Escherichia coli

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An estimation method for inference of gene regulatory net-work using Bayesian network with uniting of partial problems

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The dipeptidyl peptidase‐4 (DPP‐4) inhibitor teneligliptin enhances brown adipose tissue function, thereby preventing obesity in mice

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Metagenome fragment classification based on multiple motif-occurrence profiles

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Multilevel comparative analysis of the contributions of genome reduction and heat shock to the Escherichia colitranscriptome

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