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Transcriptional Analysis of Temporal Gene Expression in Germinating Clostridium difficile 630 Endospores
Author / Creator:Dembek, Marcin ; Stabler, Richard A. ; Witney, Adam A. ; Wren, Brendan W. ; Fairweather, Neil F.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-05, Vol.8 (5), p.e64011
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Clinical use of whole genome sequencing for Mycobacterium tuberculosis
Author / Creator:Witney, Adam A. ; Cosgrove, Catherine A. ; Arnold, Amber ; Hinds, Jason ; Stoker, Neil G. ; Butcher, Philip D.
Publisher:England: BioMed Central Ltd
Journal title:BMC medicine, 2016-03, Vol.14 (1), p.46-46, Article 46
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Rurality and relative poverty drive acquisition of a stable and diverse gut microbiome in early childhood in a non-industrialized setting
Author / Creator:Seco-Hidalgo, Victor ; Witney, Adam A. ; Chico, Martha E. ; Vaca, Maritza ; Arevalo, Andrea ; Schuyler, Alexander J. ; Platts-Mills, Thomas A. E. ; Ster, Irina Chis ; Cooper, Philip J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2025-02, Vol.15 (1), p.5601-15, Article 5601
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Author Correction: Rurality and relative poverty drive acquisition of a stable and diverse gut microbiome in early childhood in a non-industrialized setting
Author / Creator:Seco-Hidalgo, Victor ; Witney, Adam A. ; Chico, Martha E. ; Vaca, Maritza ; Arevalo, Andrea ; Schuyler, Alexander J. ; Platts-Mills, Thomas A. E. ; Ster, Irina Chis ; Cooper, Philip J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2025-04, Vol.15 (1), p.11154-1, Article 11154
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Vaginal microbiota in ethnically diverse young women who did or did not develop pelvic inflammatory disease: community-based prospective study
Author / Creator:Kerry-Barnard, Sarah ; Zhou, Liqing ; Phillips, Laura ; Furegato, Martina ; Witney, Adam A ; Sadiq, S Tariq ; Oakeshott, Pippa
Publisher:England: BMJ Publishing Group Ltd
Journal title:Sexually transmitted infections, 2022-11, Vol.98 (7), p.503-509
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High Prevalence of Antibiotic-Resistant Mycoplasma genitalium in Nongonococcal Urethritis: The Need for Routine Testing and the Inadequacy of Current Treatment Options
Author / Creator:Pond, Marcus J. ; Nori, Achyuta V. ; Witney, Adam A. ; Lopeman, Rose C. ; Butcher, Philip D. ; Sadiq, Syed Tariq
Publisher:Oxford: OXFORD UNIVERSITY PRESS
Journal title:Clinical infectious diseases, 2014-03, Vol.58 (5), p.631-637
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Emergence of phenotypic and genotypic antimicrobial resistance in Mycobacterium tuberculosis
Author / Creator:Kloprogge, Frank ; Ortiz Canseco, Julio ; Phee, Lynette ; Sadouki, Zahra ; Kipper, Karin ; Witney, Adam A. ; Stoker, Neil ; McHugh, Timothy D.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-12, Vol.12 (1), p.21429-21429, Article 21429
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Use of whole-genome sequencing to distinguish relapse from reinfection in a completed tuberculosis clinical trial
Author / Creator:Witney, Adam A. ; Bateson, Anna L. E. ; Jindani, Amina ; Phillips, Patrick P. J. ; Coleman, David ; Stoker, Neil G. ; Butcher, Philip D. ; McHugh, Timothy D.
Publisher:England: BioMed Central Ltd
Journal title:BMC medicine, 2017-03, Vol.15 (1), p.71-71, Article 71
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Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study
Author / Creator:Stirrup, Oliver ; Blackstone, James ; Mapp, Fiona ; MacNeil, Alyson ; Panca, Monica ; Holmes, Alison ; Machin, Nicholas ; Shin, Gee Yen ; Mahungu, Tabitha ; Saeed, Kordo ; Saluja, Tranprit ; Taha, Yusri ; Mahida, Nikunj ; Pope, Cassie ; Chawla, Anu ; Cutino-Moguel, Maria-Teresa ; Tamuri, Asif ; Williams, Rachel ; Darby, Alistair ; Robertson, David L ; Flaviani, Flavia ; Nastouli, Eleni ; Robson, Samuel ; Smith, Darren ; Loose, Matthew ; Laing, Kenneth ; Monahan, Irene ; Kele, Beatrix ; Haldenby, Sam ; George, Ryan ; Bashton, Matthew ; Witney, Adam A ; Byott, Matthew ; Coll, Francesc ; Chapman, Michael ; Peacock, Sharon J ; Hughes, Joseph ; Nebbia, Gaia ; Partridge, David G ; Parker, Matthew ; Price, James Richard ; Peters, Christine ; Roy, Sunando ; Snell, Luke B ; de Silva, Thushan I ; Thomson, Emma ; Flowers, Paul ; Copas, Andrew ; Breuer, Judith
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2022-09, Vol.11
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A proteomic view of the Plasmodium falciparum life cycle
Author / Creator:Florens, Laurence ; Washburn, Michael P. ; Raine, J. Dale ; Anthony, Robert M. ; Grainger, Munira ; Haynes, J. David ; Moch, J. Kathleen ; Muster, Nemone ; Sacci, John B. ; Tabb, David L. ; Witney, Adam A. ; Wolters, Dirk ; Wu, Yimin ; Gardner, Malcolm J. ; Holder, Anthony A. ; Sinden, Robert E. ; Yates, John R. ; Carucci, Daniel J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2002-10, Vol.419 (6906), p.520-526
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Genetic variation in Mycobacterium tuberculosis isolates from a London outbreak associated with isoniazid resistance
Author / Creator:Satta, Giovanni ; Witney, Adam A. ; Shorten, Robert J. ; Karlikowska, Magdalena ; Lipman, Marc ; McHugh, Timothy D.
Publisher:England: BioMed Central Ltd
Journal title:BMC medicine, 2016-08, Vol.14 (1), p.117-117, Article 117
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Whole-genome sequencing illuminates the evolution and spread of multidrug-resistant tuberculosis in Southwest Nigeria
Author / Creator:Senghore, Madikay ; Otu, Jacob ; Witney, Adam ; Gehre, Florian ; Doughty, Emma L. ; Kay, Gemma L. ; Butcher, Phillip ; Salako, Kayode ; Kehinde, Aderemi ; Onyejepu, Nneka ; Idigbe, Emmanuel ; Corrah, Tumani ; de Jong, Bouke ; Pallen, Mark J. ; Antonio, Martin
Publisher:United States: Public Library of Science
Journal title:PloS one, 2017-09, Vol.12 (9), p.e0184510-e0184510
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A comparison of phenotypic and WGS drug susceptibility testing in Mycobacterium tuberculosis isolates from the Republic of Korea
Author / Creator:Lee, Seung Heon ; Ferran, Elena ; Witney, Adam A ; Ryu, Sungweon ; Kang, Hyungseok ; Storey, Nathaniel ; McHugh, Timothy D ; Satta, Giovanni
Publisher:US: Oxford University Press
Journal title:JAC-antimicrobial resistance, 2023-06, Vol.5 (3), p.dlad056-dlad056
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Identification of Streptococcus suis Meningitis through Population-Based Surveillance, Togo, 2010–2014
Author / Creator:Tall, Haoua ; Njanpop-Lafourcade, Berthe-Marie ; Mounkoro, Didier ; Tidjani, Loukoumane ; Agbenoko, Kodjo ; Alassani, Issifou ; Amidou, Moussa ; Tamekloe, Stanislas ; Laing, Kenneth G. ; Witney, Adam A. ; Hinds, Jason ; van der Linden, Mark P.G. ; Gessner, Bradford D. ; Moïsi, Jennifer C.
Publisher:United States: U.S. National Center for Infectious Diseases
Journal title:Emerging infectious diseases, 2016-07, Vol.22 (7), p.1262-1264
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Comparative phylogenomics of the food-borne pathogen Campylobacter jejuni reveals genetic markers predictive of infection source
Author / Creator:Champion, O.L ; Gaunt, M.W ; Gundogdu, O ; Elmi, A ; Witney, A.A ; Hinds, J ; Dorrell, N ; Wren, B.W
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2005-11, Vol.102 (44), p.16043-16048
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Antibiotic Susceptibility, Virulome, and Clinical Outcomes in European Infants with Bloodstream Infections Caused by Enterobacterales
Author / Creator:Folgori, Laura ; Di Carlo, Domenico ; Comandatore, Francesco ; Piazza, Aurora ; Witney, Adam A. ; Bresesti, Ilia ; Hsia, Yingfen ; Laing, Kenneth ; Monahan, Irene ; Bielicki, Julia ; Alvaro, Alessandro ; Zuccotti, Gian Vincenzo ; Planche, Tim ; Heath, Paul T. ; Sharland, Mike
Publisher:Basel: MDPI AG
Journal title:Antibiotics (Basel), 2021-06, Vol.10 (6), p.706
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Identification of Plasmodium falciparum Antigens by Antigenic Analysis of Genomic and Proteomic Data
Author / Creator:Doolan, Denise L. ; Southwood, Scott ; Freilich, Daniel A. ; Sidney, John ; Graber, Norma L. ; Shatney, Lori ; Bebris, Lolita ; Florens, Laurence ; Dobano, Carlota ; Witney, Adam A. ; Appella, Ettore ; Hoffman, Stephen L. ; Yates, John R. ; Carucci, Daniel J. ; Sette, Alessandro
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2003-08, Vol.100 (17), p.9952-9957
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Mycobacterium tuberculosis Is Resistant to Isoniazid at a Slow Growth Rate by Single Nucleotide Polymorphisms in katG Codon Ser315
Author / Creator:Jeeves, Rose E. ; Marriott, Alice A. N. ; Pullan, Steven T. ; Hatch, Kim A. ; Allnutt, Jon C. ; Freire-Martin, Irene ; Hendon-Dunn, Charlotte L. ; Watson, Robert ; Witney, Adam A. ; Tyler, Richard H. ; Arnold, Catherine ; Marsh, Philip D. ; McHugh, Timothy D. ; Bacon, Joanna
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015, Vol.10 (9), p.e0138253-e0138253
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Genetic Variation in Spatio-Temporal Confined USA300 Community-Associated MRSA Isolates: A Shift from Clonal Dispersion to Genetic Evolution?
Author / Creator:Carpaij, Neeltje ; Willems, Rob J. L. ; Rice, Thomas W. ; Weinstein, Robert A. ; Hinds, Jason ; Witney, Adam A. ; Lindsay, Jodi A. ; Bonten, Marc J. M. ; Fluit, Ad C.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-02, Vol.6 (2), p.e16419-e16419
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Deciphering the response of Mycobacterium smegmatis to nitrogen stress using bipartite active modules
Author / Creator:Williams, Kerstin J ; Bryant, William A ; Jenkins, Victoria A ; Barton, Geraint R ; Witney, Adam A ; Pinney, John W ; Robertson, Brian D
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2013-07, Vol.14 (1), p.436-436, Article 436
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Showing 1 to 20 of 36 results

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Transcriptional Analysis of Temporal Gene Expression in Germinating Clostridium difficile 630 Endospores

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Clinical use of whole genome sequencing for Mycobacterium tuberculosis

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Rurality and relative poverty drive acquisition of a stable and diverse gut microbiome in early childhood in a non-industrialized setting

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Author Correction: Rurality and relative poverty drive acquisition of a stable and diverse gut microbiome in early childhood in a non-industrialized setting

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Vaginal microbiota in ethnically diverse young women who did or did not develop pelvic inflammatory disease: community-based prospective study

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High Prevalence of Antibiotic-Resistant Mycoplasma genitalium in Nongonococcal Urethritis: The Need for Routine Testing and the Inadequacy of Current Treatment Options

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Emergence of phenotypic and genotypic antimicrobial resistance in Mycobacterium tuberculosis

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Use of whole-genome sequencing to distinguish relapse from reinfection in a completed tuberculosis clinical trial

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Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study

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A proteomic view of the Plasmodium falciparum life cycle

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Genetic variation in Mycobacterium tuberculosis isolates from a London outbreak associated with isoniazid resistance

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Whole-genome sequencing illuminates the evolution and spread of multidrug-resistant tuberculosis in Southwest Nigeria

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A comparison of phenotypic and WGS drug susceptibility testing in Mycobacterium tuberculosis isolates from the Republic of Korea

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Identification of Streptococcus suis Meningitis through Population-Based Surveillance, Togo, 2010–2014

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Comparative phylogenomics of the food-borne pathogen Campylobacter jejuni reveals genetic markers predictive of infection source

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Antibiotic Susceptibility, Virulome, and Clinical Outcomes in European Infants with Bloodstream Infections Caused by Enterobacterales

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Identification of Plasmodium falciparum Antigens by Antigenic Analysis of Genomic and Proteomic Data

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Mycobacterium tuberculosis Is Resistant to Isoniazid at a Slow Growth Rate by Single Nucleotide Polymorphisms in katG Codon Ser315

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Genetic Variation in Spatio-Temporal Confined USA300 Community-Associated MRSA Isolates: A Shift from Clonal Dispersion to Genetic Evolution?

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Deciphering the response of Mycobacterium smegmatis to nitrogen stress using bipartite active modules

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