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ArticlesPeer ReviewedFull Text
Identification of ligand-specific G protein-coupled receptor states and prediction of downstream efficacy via data-driven modeling
Author / Creator:Fleetwood, Oliver ; Carlsson, Jens ; Delemotte, Lucie
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2021-01, Vol.10
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Positive allosteric mechanisms of adenosine A1 receptor-mediated analgesia
Author / Creator:Draper-Joyce, Christopher J. ; Bhola, Rebecca ; Wang, Jinan ; Bhattarai, Apurba ; Nguyen, Anh T. N. ; Cowie-Kent, India ; O’Sullivan, Kelly ; Chia, Ling Yeong ; Venugopal, Hariprasad ; Valant, Celine ; Thal, David M. ; Wootten, Denise ; Panel, Nicolas ; Carlsson, Jens ; Christie, Macdonald J. ; White, Paul J. ; Scammells, Peter ; May, Lauren T. ; Sexton, Patrick M. ; Danev, Radostin ; Miao, Yinglong ; Glukhova, Alisa ; Imlach, Wendy L. ; Christopoulos, Arthur
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2021-09, Vol.597 (7877), p.571-576
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Performance of virtual screening against GPCR homology models: Impact of template selection and treatment of binding site plasticity
Author / Creator:Jaiteh, Mariama ; Rodríguez-Espigares, Ismael ; Selent, Jana ; Carlsson, Jens
Publisher:United States: Public Library of Science
Journal title:PLoS computational biology, 2020-03, Vol.16 (3), p.e1007680
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Can molecular dynamics simulations improve the structural accuracy and virtual screening performance of GPCR models?
Author / Creator:Kapla, Jon ; Rodríguez-Espigares, Ismael ; Ballante, Flavio ; Selent, Jana ; Carlsson, Jens
Publisher:United States: Public Library of Science
Journal title:PLoS computational biology, 2021-05, Vol.17 (5), p.e1008936
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A conserved molecular switch in Class F receptors regulates receptor activation and pathway selection
Author / Creator:Wright, Shane C. ; Kozielewicz, Paweł ; Kowalski-Jahn, Maria ; Petersen, Julian ; Bowin, Carl-Fredrik ; Slodkowicz, Greg ; Marti-Solano, Maria ; Rodríguez, David ; Hot, Belma ; Okashah, Najeah ; Strakova, Katerina ; Valnohova, Jana ; Babu, M. Madan ; Lambert, Nevin A. ; Carlsson, Jens ; Schulte, Gunnar
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2019-02, Vol.10 (1), p.667-12, Article 667
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The use of environmental DNA metabarcoding and quantitative PCR for molecular detection of marine invasive non-native species associated with artificial structures
Author / Creator:Gargan, Laura M ; Brooks, Paul R ; Vye, Siobhan R ; Ironside, Joseph E ; Jenkins, Stuart R ; Crowe, Tasman P ; Carlsson Jens
Publisher:Dordrecht: Springer Nature B.V
Journal title:Biological invasions, 2022-03, Vol.24 (3), p.635-648
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Ligand discovery from a dopamine D3 receptor homology model and crystal structure
Author / Creator:Carlsson, Jens ; Coleman, Ryan G ; Setola, Vincent ; Irwin, John J ; Fan, Hao ; Schlessinger, Avner ; Sali, Andrej ; Roth, Bryan L ; Shoichet, Brian K
Publisher:New York: Nature Publishing Group US
Journal title:Nature chemical biology, 2011-09, Vol.7 (11), p.769-778
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Investigation of the transcriptomic response in Atlantic salmon (Salmo salar) gill exposed to Paramoeba perurans during early onset of disease
Author / Creator:Talbot, Anita ; Gargan, Laura ; Moran, Grainne ; Prudent, Louis ; O’Connor, Ian ; Mirimin, Luca ; Carlsson, Jens ; MacCarthy, Eugene
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-10, Vol.11 (1), p.20682-15, Article 20682
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Establishing mammalian GLUT kinetics and lipid composition influences in a reconstituted-liposome system
Author / Creator:Suades, Albert ; Qureshi, Aziz ; McComas, Sarah E. ; Coinçon, Mathieu ; Rudling, Axel ; Chatzikyriakidou, Yurie ; Landreh, Michael ; Carlsson, Jens ; Drew, David
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-07, Vol.14 (1), p.4070-16, Article 4070
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Agonist-induced dimer dissociation as a macromolecular step in G protein-coupled receptor signaling
Author / Creator:Petersen, Julian ; Wright, Shane C. ; Rodríguez, David ; Matricon, Pierre ; Lahav, Noa ; Vromen, Aviv ; Friedler, Assaf ; Strömqvist, Johan ; Wennmalm, Stefan ; Carlsson, Jens ; Schulte, Gunnar
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2017-08, Vol.8 (1), p.226-15, Article 226
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2-Aryladenine Derivatives as a Potent Scaffold for Adenosine Receptor Antagonists: The 6-Morpholino Derivatives
Author / Creator:Areias, Filipe ; Correia, Carla ; Rocha, Ashly ; Teixeira, Sofia ; Castro, Marián ; Brea, Jose ; Hu, Huabin ; Carlsson, Jens ; Loza, Maria I. ; Proença, M. Fernanda ; Carvalho, M. Alice
Publisher:Switzerland: MDPI AG
Journal title:Molecules (Basel, Switzerland), 2024-06, Vol.29 (11), p.2543
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Understanding the Role of GPCR Heteroreceptor Complexes in Modulating the Brain Networks in Health and Disease
Author / Creator:Borroto-Escuela, Dasiel O. ; Carlsson, Jens ; Ambrogini, Patricia ; Narváez, Manuel ; Wydra, Karolina ; Tarakanov, Alexander O. ; Li, Xiang ; Millón, Carmelo ; Ferraro, Luca ; Cuppini, Riccardo ; Tanganelli, Sergio ; Liu, Fang ; Filip, Malgorzata ; Diaz-Cabiale, Zaida ; Fuxe, Kjell
Publisher:Switzerland: Frontiers Research Foundation
Journal title:Frontiers in cellular neuroscience, 2017-02, Vol.11, p.37
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Virtual fragment screening for DNA repair inhibitors in vast chemical space
Author / Creator:Luttens, Andreas ; Vo, Duc Duy ; Scaletti, Emma R. ; Wiita, Elisée ; Almlöf, Ingrid ; Wallner, Olov ; Davies, Jonathan ; Košenina, Sara ; Meng, Liuzhen ; Long, Maeve ; Mortusewicz, Oliver ; Masuyer, Geoffrey ; Ballante, Flavio ; Michel, Maurice ; Homan, Evert ; Scobie, Martin ; Kalderén, Christina ; Warpman Berglund, Ulrika ; Tarnovskiy, Andrii V. ; Radchenko, Dmytro S. ; Moroz, Yurii S. ; Kihlberg, Jan ; Stenmark, Pål ; Helleday, Thomas ; Carlsson, Jens
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2025-02, Vol.16 (1), p.1741-16, Article 1741
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The role of free-flowing tributary rivers in the maintenance of genetic diversity of a migratory fish species living in a river fragmented by dams
Author / Creator:Ferreira, Dhiego G. ; Carlsson, Jens ; Galindo, Bruno A. ; Frantine-Silva, Wilson ; Apolinário-Silva, Caroline ; Meschini, Jéssica S. ; Zanatta, Augusto S. ; Almeida, Fernanda S. ; Sofia, Silvia H.
Publisher:Cham: Springer International Publishing
Journal title:Hydrobiologia, 2022-03, Vol.849 (5), p.1221-1237
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Genetic structure and diversity of migratory freshwater fish in a fragmented Neotropical river system
Author / Creator:Ferreira, Dhiego Gomes ; Souza-Shibatta, Lenice ; Shibatta, Oscar Akio ; Sofia, Silvia Helena ; Carlsson, Jens ; Dias, João Henrique Pinheiro ; Makrakis, Sergio ; Makrakis, Maristela Cavicchioli
Publisher:Cham: Springer International Publishing
Journal title:Reviews in fish biology and fisheries, 2017-03, Vol.27 (1), p.209-231
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Publisher Correction: A practical guide to large-scale docking
Author / Creator:Bender, Brian J ; Gahbauer, Stefan ; Luttens Andreas ; Lyu Jiankun ; Webb, Chase M ; Stein, Reed M ; Fink, Elissa A ; Balius, Trent E ; Carlsson Jens ; Irwin, John J ; Shoichet, Brian K
Publisher:London: Nature Publishing Group
Journal title:Nature protocols, 2022-01, Vol.17 (1), p.177-177
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Nanopore metatranscriptomics reveals cryptic catfish species as potential Shigella flexneri vectors in Kenya
Author / Creator:Tighe, Andrew J. ; Grayson, Sean ; Byrne, John ; Hintikka, Sanni ; Jessen, Lisa ; Dempsey, Jake ; Browne, Lauren ; Kelly-Quinn, Mary ; Fulanda, Bernerd ; Ruane, Neil M. ; Carlsson, Jens
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-08, Vol.12 (1), p.13875-8, Article 13875
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The Dark mAtteR iNvestigator (DARN) tool: getting to know the known unknowns in COI amplicon data
Author / Creator:Zafeiropoulos, Haris ; Gargan, Laura ; Hintikka, Sanni ; Pavloudi, Christina ; Carlsson, Jens
Publisher:Sofia: Pensoft Publishers
Journal title:Metabarcoding and Metagenomics, 2021-11, Vol.5, p.3968-174
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Development and Characterization of Novel Selective, Non-Basic Dopamine D2 Receptor Antagonists for the Treatment of Schizophrenia
Author / Creator:Stępnicki, Piotr ; Wośko, Sylwia ; Bartyzel, Agata ; Zięba, Agata ; Bartuzi, Damian ; Szałaj, Klaudia ; Wróbel, Tomasz M. ; Fornal, Emilia ; Carlsson, Jens ; Kędzierska, Ewa ; Poleszak, Ewa ; Castro, Marián ; Kaczor, Agnieszka A.
Publisher:Basel: MDPI AG
Journal title:Molecules (Basel, Switzerland), 2023-05, Vol.28 (10), p.4211
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The bacterial hitchhiker’s guide to COI: Universal primer-based COI capture probes fail to exclude bacterial DNA, but 16S capture leaves metazoa behind
Author / Creator:Hintikka, Sanni ; Carlsson, Jeanette E.L. ; Carlsson, Jens
Publisher:Pensoft Publishers
Journal title:Metabarcoding and Metagenomics, 2022-05, Vol.6, p.145-159
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Identification of ligand-specific G protein-coupled receptor states and prediction of downstream efficacy via data-driven modeling

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Positive allosteric mechanisms of adenosine A1 receptor-mediated analgesia

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Performance of virtual screening against GPCR homology models: Impact of template selection and treatment of binding site plasticity

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Can molecular dynamics simulations improve the structural accuracy and virtual screening performance of GPCR models?

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A conserved molecular switch in Class F receptors regulates receptor activation and pathway selection

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The use of environmental DNA metabarcoding and quantitative PCR for molecular detection of marine invasive non-native species associated with artificial structures

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Ligand discovery from a dopamine D3 receptor homology model and crystal structure

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Investigation of the transcriptomic response in Atlantic salmon (Salmo salar) gill exposed to Paramoeba perurans during early onset of disease

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Establishing mammalian GLUT kinetics and lipid composition influences in a reconstituted-liposome system

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Agonist-induced dimer dissociation as a macromolecular step in G protein-coupled receptor signaling

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2-Aryladenine Derivatives as a Potent Scaffold for Adenosine Receptor Antagonists: The 6-Morpholino Derivatives

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Understanding the Role of GPCR Heteroreceptor Complexes in Modulating the Brain Networks in Health and Disease

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Virtual fragment screening for DNA repair inhibitors in vast chemical space

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The role of free-flowing tributary rivers in the maintenance of genetic diversity of a migratory fish species living in a river fragmented by dams

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Genetic structure and diversity of migratory freshwater fish in a fragmented Neotropical river system

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Publisher Correction: A practical guide to large-scale docking

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Nanopore metatranscriptomics reveals cryptic catfish species as potential Shigella flexneri vectors in Kenya

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The Dark mAtteR iNvestigator (DARN) tool: getting to know the known unknowns in COI amplicon data

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Development and Characterization of Novel Selective, Non-Basic Dopamine D2 Receptor Antagonists for the Treatment of Schizophrenia

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The bacterial hitchhiker’s guide to COI: Universal primer-based COI capture probes fail to exclude bacterial DNA, but 16S capture leaves metazoa behind

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