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ArticlesPeer ReviewedFull Text
Interpreting Meta-Analyses of Genome-Wide Association Studies
Author / Creator:Han, Buhm ; Eskin, Eleazar
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2012-03, Vol.8 (3), p.e1002555-e1002555
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A theory-based practical solution to correct for sex-differential participation bias
Author / Creator:Lee, Hanbin ; Han, Buhm
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2022-06, Vol.23 (1), p.138-138, Article 138
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ArticlesPeer ReviewedFull Text
Chromatin marks identify critical cell types for fine mapping complex trait variants
Author / Creator:Trynka, Gosia ; Sandor, Cynthia ; Han, Buhm ; Xu, Han ; Stranger, Barbara E ; Liu, X Shirley ; Raychaudhuri, Soumya
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2013-02, Vol.45 (2), p.124-130
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Accurate imputation of human leukocyte antigens with CookHLA
Author / Creator:Cook, Seungho ; Choi, Wanson ; Lim, Hyunjoon ; Luo, Yang ; Kim, Kunhee ; Jia, Xiaoming ; Raychaudhuri, Soumya ; Han, Buhm
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-02, Vol.12 (1), p.1264-1264, Article 1264
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Exosomal PD-L1 promotes tumor growth through immune escape in non-small cell lung cancer
Author / Creator:Kim, Dong Ha ; Kim, HyeongRyul ; Choi, Yun Jung ; Kim, Seon Ye ; Lee, Jung-Eun ; Sung, Ki Jung ; Sung, Young Hoon ; Pack, Chan-Gi ; Jung, Min-kyo ; Han, Buhm ; Kim, Kunhee ; Kim, Woo Sung ; Nam, Soo Jeong ; Choi, Chang-Min ; Yun, Miyong ; Lee, Jae Cheol ; Rho, Jin Kyung
Publisher:London: Nature Publishing Group UK
Journal title:Experimental and Molecular Medicine, 2019, 51(0), , pp.1-13
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ArticlesPeer ReviewedFull Text
Imputing Amino Acid Polymorphisms in Human Leukocyte Antigens
Author / Creator:Jia, Xiaoming ; Han, Buhm ; Onengut-Gumuscu, Suna ; Chen, Wei-Min ; Concannon, Patrick J. ; Rich, Stephen S. ; Raychaudhuri, Soumya ; de Bakker, Paul I.W.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-06, Vol.8 (6), p.e64683-e64683
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ArticlesPeer ReviewedFull Text
Rare variants regulate expression of nearby individual genes in multiple tissues
Author / Creator:Li, Jiajin ; Kong, Nahyun ; Han, Buhm ; Sul, Jae Hoon
Publisher:San Francisco: Public Library of Science
Journal title:PLoS genetics, 2021-06, Vol.17 (6), p.e1009596-e1009596
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PASTRY: achieving balanced power for detecting risk and protective minor alleles in meta-analysis of association studies with overlapping subjects
Author / Creator:Kim, Emma E. ; Jang, Chloe Soohyun ; Kim, Hakin ; Han, Buhm
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2024-01, Vol.25 (1), p.24-24, Article 24
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Additive and interaction effects at three amino acid positions in HLA-DQ and HLA-DR molecules drive type 1 diabetes risk
Author / Creator:Hu, Xinli ; Deutsch, Aaron J ; Lenz, Tobias L ; Onengut-Gumuscu, Suna ; Han, Buhm ; Chen, Wei-Min ; Howson, Joanna M M ; Todd, John A ; de Bakker, Paul I W ; Rich, Stephen S ; Raychaudhuri, Soumya
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2015-08, Vol.47 (8), p.898-905
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Rapid and Accurate Multiple Testing Correction and Power Estimation for Millions of Correlated Markers
Author / Creator:Han, Buhm ; Kang, Hyun Min ; Eskin, Eleazar
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2009-04, Vol.5 (4), p.e1000456-e1000456
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Dynamic increase of M2 macrophages is associated with disease progression of colorectal cancers following cetuximab-based treatment
Author / Creator:Kim, Hyung-Don ; Kim, Sun Young ; Kim, Jihun ; Kim, Jeong Eun ; Hong, Yong Sang ; Han, Buhm ; Tak, Eunyoung ; Ryu, Yeon-Mi ; Kim, Sang-Yeob ; Kim, Tae Won
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-01, Vol.12 (1), p.1678-1678, Article 1678
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Tutorial: a statistical genetics guide to identifying HLA alleles driving complex disease
Author / Creator:Sakaue, Saori ; Gurajala, Saisriram ; Curtis, Michelle ; Luo, Yang ; Choi, Wanson ; Ishigaki, Kazuyoshi ; Kang, Joyce B. ; Rumker, Laurie ; Deutsch, Aaron J. ; Schönherr, Sebastian ; Forer, Lukas ; LeFaive, Jonathon ; Fuchsberger, Christian ; Han, Buhm ; Lenz, Tobias L. ; de Bakker, Paul I. W. ; Okada, Yukinori ; Smith, Albert V. ; Raychaudhuri, Soumya
Publisher:London: Nature Publishing Group UK
Journal title:Nature protocols, 2023-09, Vol.18 (9), p.2625-2641
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ArticlesPeer ReviewedFull Text
MicroPredict: predicting species-level taxonomic abundance of whole-shotgun metagenomic data using only 16S amplicon sequencing data
Author / Creator:Jang, Chloe Soohyun ; Kim, Hakin ; Kim, Donghyun ; Han, Buhm
Publisher:Singapore: Springer Nature Singapore
Journal title:Genes & Genomics, 2024, 46(6), , pp.701-712
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Genomic GPS: using genetic distance from individuals to public data for genomic analysis without disclosing personal genomes
Author / Creator:Kim, Kunhee ; Baik, Hyungryul ; Jang, Chloe Soohyun ; Roh, Jin Kyung ; Eskin, Eleazer ; Han, Buhm
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2019-08, Vol.20 (1), p.175-175, Article 175
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Prognostic value of the association between MHC class I downregulation and PD-L1 upregulation in head and neck squamous cell carcinoma patients
Author / Creator:Yoo, Shin Hye ; Keam, Bhumsuk ; Ock, Chan-Young ; Kim, Sehui ; Han, Buhm ; Kim, Ji-Won ; Lee, Keun-Wook ; Jeon, Yoon Kyung ; Jung, Kyeong Cheon ; Chung, Eun-Jae ; Kwon, Seong Keun ; Ahn, Soon-Hyun ; Sung, Myung-Whun ; Heo, Dae Seog
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-05, Vol.9 (1), p.7680-7680, Article 7680
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ArticlesPeer ReviewedFull Text
The HLA-DRβ1 amino acid positions 11–13–26 explain the majority of SLE–MHC associations
Author / Creator:Kim, Kwangwoo ; Bang, So-Young ; Lee, Hye-Soon ; Okada, Yukinori ; Han, Buhm ; Saw, Woei-Yuh ; Teo, Yik-Ying ; Bae, Sang-Cheol
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2014-12, Vol.5 (1), p.5902-5902, Article 5902
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ArticlesPeer ReviewedFull Text
A weighted genetic risk score using all known susceptibility variants to estimate rheumatoid arthritis risk
Author / Creator:Yarwood, Annie ; Han, Buhm ; Raychaudhuri, Soumya ; Bowes, John ; Lunt, Mark ; Pappas, Dimitrios A ; Kremer, Joel ; Greenberg, Jeffrey D ; Plenge, Robert ; Worthington, Jane ; Barton, Anne ; Eyre, Steve
Publisher:United States: BMJ Publishing Group
Journal title:Annals of the rheumatic diseases, 2015-01, Vol.74 (1), p.170-176
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Variation at HLA-DRB1 is associated with resistance to enteric fever
Author / Creator:Dunstan, Sarah J ; Hue, Nguyen Thi ; Han, Buhm ; Li, Zheng ; Tram, Trinh Thi Bich ; Sim, Kar Seng ; Parry, Christopher M ; Chinh, Nguyen Tran ; Vinh, Ha ; Lan, Nguyen Phu Huong ; Thieu, Nga Tran Vu ; Vinh, Phat Voong ; Koirala, Samir ; Dongol, Sabina ; Arjyal, Amit ; Karkey, Abhilasha ; Shilpakar, Olita ; Dolecek, Christiane ; Foo, Jia Nee ; Phuong, Le Thi ; Lanh, Mai Ngoc ; Do, Tan ; Aung, Tin ; Hon, Do Nu ; Teo, Yik Ying ; Hibberd, Martin L ; Anders, Katherine L ; Okada, Yukinori ; Raychaudhuri, Soumya ; Simmons, Cameron P ; Baker, Stephen ; de Bakker, Paul I W ; Basnyat, Buddha ; Hien, Tran Tinh ; Farrar, Jeremy J ; Khor, Chiea Chuen
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2014-12, Vol.46 (12), p.1333-1336
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ArticlesPeer ReviewedFull Text
A method to decipher pleiotropy by detecting underlying heterogeneity driven by hidden subgroups applied to autoimmune and neuropsychiatric diseases
Author / Creator:Han, Buhm ; Pouget, Jennie G ; Slowikowski, Kamil ; Stahl, Eli ; Lee, Cue Hyunkyu ; Diogo, Dorothee ; Hu, Xinli ; Park, Yu Rang ; Kim, Eunji ; Gregersen, Peter K ; Dahlqvist, Solbritt Rantapää ; Worthington, Jane ; Martin, Javier ; Eyre, Steve ; Klareskog, Lars ; Huizinga, Tom ; Chen, Wei-Min ; Onengut-Gumuscu, Suna ; Rich, Stephen S ; Wray, Naomi R ; Raychaudhuri, Soumya
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2016-07, Vol.48 (7), p.803-810
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Meta-Analysis Identifies Gene-by-Environment Interactions as Demonstrated in a Study of 4,965 Mice
Author / Creator:Kang, Eun Yong ; Han, Buhm ; Furlotte, Nicholas ; Joo, Jong Wha J. ; Shih, Diana ; Davis, Richard C. ; Lusis, Aldons J. ; Eskin, Eleazar
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2014-01, Vol.10 (1), p.e1004022-e1004022
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Showing 1 to 20 of 62 results

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Interpreting Meta-Analyses of Genome-Wide Association Studies

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A theory-based practical solution to correct for sex-differential participation bias

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Chromatin marks identify critical cell types for fine mapping complex trait variants

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Accurate imputation of human leukocyte antigens with CookHLA

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Exosomal PD-L1 promotes tumor growth through immune escape in non-small cell lung cancer

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Imputing Amino Acid Polymorphisms in Human Leukocyte Antigens

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Rare variants regulate expression of nearby individual genes in multiple tissues

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PASTRY: achieving balanced power for detecting risk and protective minor alleles in meta-analysis of association studies with overlapping subjects

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Additive and interaction effects at three amino acid positions in HLA-DQ and HLA-DR molecules drive type 1 diabetes risk

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Rapid and Accurate Multiple Testing Correction and Power Estimation for Millions of Correlated Markers

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Dynamic increase of M2 macrophages is associated with disease progression of colorectal cancers following cetuximab-based treatment

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Tutorial: a statistical genetics guide to identifying HLA alleles driving complex disease

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MicroPredict: predicting species-level taxonomic abundance of whole-shotgun metagenomic data using only 16S amplicon sequencing data

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Genomic GPS: using genetic distance from individuals to public data for genomic analysis without disclosing personal genomes

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Prognostic value of the association between MHC class I downregulation and PD-L1 upregulation in head and neck squamous cell carcinoma patients

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The HLA-DRβ1 amino acid positions 11–13–26 explain the majority of SLE–MHC associations

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A weighted genetic risk score using all known susceptibility variants to estimate rheumatoid arthritis risk

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Variation at HLA-DRB1 is associated with resistance to enteric fever

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A method to decipher pleiotropy by detecting underlying heterogeneity driven by hidden subgroups applied to autoimmune and neuropsychiatric diseases

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Meta-Analysis Identifies Gene-by-Environment Interactions as Demonstrated in a Study of 4,965 Mice

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