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Machine learning for RNA sequencing-based intrinsic subtyping of breast cancer
Author / Creator:Cascianelli, Silvia ; Molineris, Ivan ; Isella, Claudio ; Masseroli, Marco ; Medico, Enzo
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-08, Vol.10 (1), p.14071-14071, Article 14071
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Stromal contribution to the colorectal cancer transcriptome
Author / Creator:Isella, Claudio ; Terrasi, Andrea ; Bellomo, Sara Erika ; Petti, Consalvo ; Galatola, Giovanni ; Muratore, Andrea ; Mellano, Alfredo ; Senetta, Rebecca ; Cassenti, Adele ; Sonetto, Cristina ; Inghirami, Giorgio ; Trusolino, Livio ; Fekete, Zsolt ; De Ridder, Mark ; Cassoni, Paola ; Storme, Guy ; Bertotti, Andrea ; Medico, Enzo
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2015-04, Vol.47 (4), p.312-319
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Selective analysis of cancer-cell intrinsic transcriptional traits defines novel clinically relevant subtypes of colorectal cancer
Author / Creator:Isella, Claudio ; Brundu, Francesco ; Bellomo, Sara E. ; Galimi, Francesco ; Zanella, Eugenia ; Porporato, Roberta ; Petti, Consalvo ; Fiori, Alessandro ; Orzan, Francesca ; Senetta, Rebecca ; Boccaccio, Carla ; Ficarra, Elisa ; Marchionni, Luigi ; Trusolino, Livio ; Medico, Enzo ; Bertotti, Andrea
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2017-05, Vol.8 (1), p.15107-15107, Article 15107
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The molecular landscape of colorectal cancer cell lines unveils clinically actionable kinase targets
Author / Creator:Medico, Enzo ; Russo, Mariangela ; Picco, Gabriele ; Cancelliere, Carlotta ; Valtorta, Emanuele ; Corti, Giorgio ; Buscarino, Michela ; Isella, Claudio ; Lamba, Simona ; Martinoglio, Barbara ; Veronese, Silvio ; Siena, Salvatore ; Sartore-Bianchi, Andrea ; Beccuti, Marco ; Mottolese, Marcella ; Linnebacher, Michael ; Cordero, Francesca ; Di Nicolantonio, Federica ; Bardelli, Alberto
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2015-04, Vol.6 (1), p.7002-7002, Article 7002
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A non-dividing cell population with high pyruvate dehydrogenase kinase activity regulates metabolic heterogeneity and tumorigenesis in the intestine
Author / Creator:Sebastian, Carlos ; Ferrer, Christina ; Serra, Maria ; Choi, Jee-Eun ; Ducano, Nadia ; Mira, Alessia ; Shah, Manasvi S. ; Stopka, Sylwia A. ; Perciaccante, Andrew J. ; Isella, Claudio ; Moya-Rull, Daniel ; Vara-Messler, Marianela ; Giordano, Silvia ; Maldi, Elena ; Desai, Niyati ; Capen, Diane E. ; Medico, Enzo ; Cetinbas, Murat ; Sadreyev, Ruslan I. ; Brown, Dennis ; Rivera, Miguel N. ; Sapino, Anna ; Breault, David T. ; Agar, Nathalie Y. R. ; Mostoslavsky, Raul
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-03, Vol.13 (1), p.1503-13, Article 1503
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A regulatory microRNA network controls endothelial cell phenotypic switch during sprouting angiogenesis
Author / Creator:Rosano, Stefania ; Corà, Davide ; Parab, Sushant ; Zaffuto, Serena ; Isella, Claudio ; Porporato, Roberta ; Hoza, Roxana Maria ; Calogero, Raffaele A ; Riganti, Chiara ; Bussolino, Federico ; Noghero, Alessio
Publisher:England: eLife Science Publications, Ltd
Journal title:eLife, 2020-01, Vol.9
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MicroRNA–mRNA interactions underlying colorectal cancer molecular subtypes
Author / Creator:Cantini, Laura ; Isella, Claudio ; Petti, Consalvo ; Picco, Gabriele ; Chiola, Simone ; Ficarra, Elisa ; Caselle, Michele ; Medico, Enzo
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2015-11, Vol.6 (1), p.8878-8878, Article 8878
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The clinical and biological significance of MIR-224 expression in colorectal cancer metastasis
Author / Creator:Ling, Hui ; Pickard, Karen ; Ivan, Cristina ; Isella, Claudio ; Ikuo, Mariko ; Mitter, Richard ; Spizzo, Riccardo ; Bullock, Marc D ; Braicu, Cornelia ; Pileczki, Valentina ; Vincent, Kimberly ; Pichler, Martin ; Stiegelbauer, Verena ; Hoefler, Gerald ; Almeida, Maria I ; Hsiao, Annie ; Zhang, Xinna ; Primrose, John N ; Packham, Graham K ; Liu, Kevin ; Bojja, Krishna ; Gafà, Roberta ; Xiao, Lianchun ; Rossi, Simona ; Song, Jian H ; Vannini, Ivan ; Fanini, Francesca ; Kopetz, Scott ; Zweidler-McKay, Patrick ; Wang, Xuemei ; Ionescu, Calin ; Irimie, Alexandru ; Fabbri, Muller ; Lanza, Giovanni ; Hamilton, Stanley R ; Berindan-Neagoe, Ioana ; Medico, Enzo ; Mirnezami, Alex H ; Calin, George A ; Nicoloso, Milena S
Publisher:England: BMJ Publishing Group LTD
Journal title:Gut, 2016-06, Vol.65 (6), p.977-989
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The neuronal protein Neuroligin 1 promotes colorectal cancer progression by modulating the APC/β-catenin pathway
Author / Creator:Pergolizzi, Margherita ; Bizzozero, Laura ; Maione, Federica ; Maldi, Elena ; Isella, Claudio ; Macagno, Marco ; Mariella, Elisa ; Bardelli, Alberto ; Medico, Enzo ; Marchiò, Caterina ; Serini, Guido ; Di Nicolantonio, Federica ; Bussolino, Federico ; Arese, Marco
Publisher:London: BioMed Central
Journal title:Journal of experimental & clinical cancer research, 2022-09, Vol.41 (1), p.1-16, Article 266
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Integrative ensemble modelling of cetuximab sensitivity in colorectal cancer patient-derived xenografts
Author / Creator:Perron, Umberto ; Grassi, Elena ; Chatzipli, Aikaterini ; Viviani, Marco ; Karakoc, Emre ; Trastulla, Lucia ; Brochier, Lorenzo M. ; Isella, Claudio ; Zanella, Eugenia R. ; Klett, Hagen ; Molineris, Ivan ; Schueler, Julia ; Esteller, Manel ; Medico, Enzo ; Conte, Nathalie ; McDermott, Ultan ; Trusolino, Livio ; Bertotti, Andrea ; Iorio, Francesco
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2024-11, Vol.15 (1), p.9139-20, Article 9139
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A simplified integrated molecular and immunohistochemistry-based algorithm allows high accuracy prediction of glioblastoma transcriptional subtypes
Author / Creator:Orzan, Francesca ; Pagani, Francesca ; Cominelli, Manuela ; Triggiani, Luca ; Calza, Stefano ; De Bacco, Francesca ; Medicina, Daniela ; Balzarini, Piera ; Panciani, Pier Paolo ; Liserre, Roberto ; Buglione, Michela ; Fontanella, Marco Maria ; Medico, Enzo ; Galli, Rossella ; Isella, Claudio ; Boccaccio, Carla ; Poliani, Pietro Luigi ; on behalf of the Neuro-Oncology group of Spedali Civili of Brescia
Publisher:New York: Elsevier Inc
Journal title:Laboratory investigation, 2020-10, Vol.100 (10), p.1330-1344
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Dual VEGFA/BRAF targeting boosts PD‐1 blockade in melanoma through GM‐CSF‐mediated infiltration of M1 macrophages
Author / Creator:Comunanza, Valentina ; Gigliotti, Chiara ; Lamba, Simona ; Doronzo, Gabriella ; Vallariello, Edoardo ; Martin, Valentina ; Isella, Claudio ; Medico, Enzo ; Bardelli, Alberto ; Sangiolo, Dario ; Di Nicolantonio, Federica ; Bussolino, Federico
Publisher:United States: John Wiley & Sons, Inc
Journal title:Molecular oncology, 2023-08, Vol.17 (8), p.1474-1491
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FOXA1 and AR in invasive breast cancer: new findings on their co-expression and impact on prognosis in ER-positive patients
Author / Creator:Rangel, Nelson ; Fortunati, Nicoletta ; Osella-Abate, Simona ; Annaratone, Laura ; Isella, Claudio ; Catalano, Maria Graziella ; Rinella, Letizia ; Metovic, Jasna ; Boldorini, Renzo ; Balmativola, Davide ; Ferrando, Pietro ; Marano, Francesca ; Cassoni, Paola ; Sapino, Anna ; Castellano, Isabella
Publisher:England: BioMed Central Ltd
Journal title:BMC cancer, 2018-07, Vol.18 (1), p.703-703, Article 703
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Evolving neoantigen profiles in colorectal cancers with DNA repair defects
Author / Creator:Rospo, Giuseppe ; Lorenzato, Annalisa ; Amirouchene-Angelozzi, Nabil ; Magrì, Alessandro ; Cancelliere, Carlotta ; Corti, Giorgio ; Negrino, Carola ; Amodio, Vito ; Montone, Monica ; Bartolini, Alice ; Barault, Ludovic ; Novara, Luca ; Isella, Claudio ; Medico, Enzo ; Bertotti, Andrea ; Trusolino, Livio ; Germano, Giovanni ; Di Nicolantonio, Federica ; Bardelli, Alberto
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2019-06, Vol.11 (1), p.42-42, Article 42
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Multi-label transcriptional classification of colorectal cancer reflects tumor cell population heterogeneity
Author / Creator:Cascianelli, Silvia ; Barbera, Chiara ; Ulla, Alexandra Ambra ; Grassi, Elena ; Lupo, Barbara ; Pasini, Diego ; Bertotti, Andrea ; Trusolino, Livio ; Medico, Enzo ; Isella, Claudio ; Masseroli, Marco
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2023-05, Vol.15 (1), p.37-37, Article 37
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The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization
Author / Creator:Dudová, Zdenka ; Conte, Nathalie ; Mason, Jeremy ; Stuchlík, Dalibor ; Peša, Radim ; Halmagyi, Csaba ; Perova, Zinaida ; Mosaku, Abayomi ; Thorne, Ross ; Follette, Alex ; Pivarč, Ľuboslav ; Šašinka, Radim ; Usman, Muhammad ; Neuhauser, Steven ; Begley, Dale A ; Krupke, Debra M ; Frassà, Massimiliano ; Fiori, Alessandro ; Corsi, Riccardo ; Vezzadini, Luca ; Isella, Claudio ; Bertotti, Andrea ; Bult, Carol ; Parkinson, Helen ; Medico, Enzo ; Meehan, Terrence ; Křenek, Aleš
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2022-02, Vol.23 (1), p.156-156, Article 156
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molecular signature for Epithelial to Mesenchymal transition in a human colon cancer cell system is revealed by large-scale microarray analysis
Author / Creator:Joyce, Tobias ; Cantarella, Daniela ; Isella, Claudio ; Medico, Enzo ; Pintzas, Alexander
Publisher:Dordrecht: Dordrecht : Springer Netherlands
Journal title:Clinical & experimental metastasis, 2009-08, Vol.26 (6), p.569-587
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Implementing subtype‐specific pre‐clinical models of breast cancer to study pre‐treatment aspirin effects
Author / Creator:Miller, Ian S. ; Khan, Sonja ; Shiels, Liam P. ; Das, Sudipto ; O' Farrell, Alice C. ; Connor, Kate ; Lafferty, Adam ; Moran, Bruce ; Isella, Claudio ; Loadman, Paul ; Conroy, Emer ; Cohrs, Susan ; Schibli, Roger ; Kerbel, Robert S. ; Gallagher, William M. ; Marangoni, Elisabetta ; Bennett, Kathleen ; O' Connor, Darran P. ; Dwyer, Róisín M. ; Byrne, Annette T.
Publisher:United States: John Wiley & Sons, Inc
Journal title:Cancer medicine (Malden, MA), 2022-10, Vol.11 (20), p.3820-3836
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Mulcom: a multiple comparison statistical test for microarray data in Bioconductor
Author / Creator:Isella, Claudio ; Renzulli, Tommaso ; Corà, Davide ; Medico, Enzo
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2011-09, Vol.12 (1), p.382-382, Article 382
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Exploiting orthologue diversity for systematic detection of gain-of-function phenotypes
Author / Creator:Martelli, Maria Luisa ; Isella, Claudio ; Mira, Alessia ; Fu, Limin ; Cantarella, Daniela ; Medico, Enzo
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2008-05, Vol.9 (1), p.254-254, Article 254
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Showing 1 to 20 of 38 results

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Machine learning for RNA sequencing-based intrinsic subtyping of breast cancer

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Stromal contribution to the colorectal cancer transcriptome

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Selective analysis of cancer-cell intrinsic transcriptional traits defines novel clinically relevant subtypes of colorectal cancer

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The molecular landscape of colorectal cancer cell lines unveils clinically actionable kinase targets

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A non-dividing cell population with high pyruvate dehydrogenase kinase activity regulates metabolic heterogeneity and tumorigenesis in the intestine

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A regulatory microRNA network controls endothelial cell phenotypic switch during sprouting angiogenesis

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MicroRNA–mRNA interactions underlying colorectal cancer molecular subtypes

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The clinical and biological significance of MIR-224 expression in colorectal cancer metastasis

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The neuronal protein Neuroligin 1 promotes colorectal cancer progression by modulating the APC/β-catenin pathway

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Integrative ensemble modelling of cetuximab sensitivity in colorectal cancer patient-derived xenografts

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A simplified integrated molecular and immunohistochemistry-based algorithm allows high accuracy prediction of glioblastoma transcriptional subtypes

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Dual VEGFA/BRAF targeting boosts PD‐1 blockade in melanoma through GM‐CSF‐mediated infiltration of M1 macrophages

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FOXA1 and AR in invasive breast cancer: new findings on their co-expression and impact on prognosis in ER-positive patients

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Evolving neoantigen profiles in colorectal cancers with DNA repair defects

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Multi-label transcriptional classification of colorectal cancer reflects tumor cell population heterogeneity

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The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization

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molecular signature for Epithelial to Mesenchymal transition in a human colon cancer cell system is revealed by large-scale microarray analysis

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Implementing subtype‐specific pre‐clinical models of breast cancer to study pre‐treatment aspirin effects

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Mulcom: a multiple comparison statistical test for microarray data in Bioconductor

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Exploiting orthologue diversity for systematic detection of gain-of-function phenotypes

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