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Knudsen, Beatrice S
Journal title:American Men & Women of Science : A Biographical Directory of Today’s Leaders in Physical, Biological and Related Sciences: KNO-LIS, 2022, p.6128-6129
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Knudsen, Beatrice S
Journal title:American Men & Women of Science : A Biographical Directory of Today’s Leaders in Physical, Biological and Related Sciences: KNO-LIT, 2021, p.6107-6107
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Convolutional neural networks can accurately distinguish four histologic growth patterns of lung adenocarcinoma in digital slides
Author / Creator:Gertych, Arkadiusz ; Swiderska-Chadaj, Zaneta ; Ma, Zhaoxuan ; Ing, Nathan ; Markiewicz, Tomasz ; Cierniak, Szczepan ; Salemi, Hootan ; Guzman, Samuel ; Walts, Ann E. ; Knudsen, Beatrice S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-02, Vol.9 (1), p.1483-1483, Article 1483
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Circulating microRNAs as stable blood-based markers for cancer detection
Author / Creator:Mitchell, Patrick S ; Parkin, Rachael K ; Kroh, Evan M ; Fritz, Brian R ; Wyman, Stacia K ; Pogosova-Agadjanyan, Era L ; Peterson, Amelia ; Noteboom, Jennifer ; O'Briant, Kathy C ; Allen, April ; Lin, Daniel W ; Urban, Nicole ; Drescher, Charles W ; Knudsen, Beatrice S ; Stirewalt, Derek L ; Gentleman, Robert ; Vessella, Robert L ; Nelson, Peter S ; Martin, Daniel B ; Tewari, Muneesh
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2008-07, Vol.105 (30), p.10513-10518
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Receptor-interacting protein kinase 2 (RIPK2) stabilizes c-Myc and is a therapeutic target in prostate cancer metastasis
Author / Creator:Yan, Yiwu ; Zhou, Bo ; Qian, Chen ; Vasquez, Alex ; Kamra, Mohini ; Chatterjee, Avradip ; Lee, Yeon-Joo ; Yuan, Xiaopu ; Ellis, Leigh ; Di Vizio, Dolores ; Posadas, Edwin M. ; Kyprianou, Natasha ; Knudsen, Beatrice S. ; Shah, Kavita ; Murali, Ramachandran ; Gertych, Arkadiusz ; You, Sungyong ; Freeman, Michael R. ; Yang, Wei
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-02, Vol.13 (1), p.669-17, Article 669
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Circulating microRNA profiling identifies a subset of metastatic prostate cancer patients with evidence of cancer-associated hypoxia
Author / Creator:Cheng, Heather H ; Mitchell, Patrick S ; Kroh, Evan M ; Dowell, Alexander E ; Chéry, Lisly ; Siddiqui, Javed ; Nelson, Peter S ; Vessella, Robert L ; Knudsen, Beatrice S ; Chinnaiyan, Arul M ; Pienta, Kenneth J ; Morrissey, Colm ; Tewari, Muneesh
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-07, Vol.8 (7), p.e69239-e69239
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ArticlesPeer ReviewedFull Text
Repertoire of microRNAs in epithelial ovarian cancer as determined by next generation sequencing of small RNA cDNA libraries
Author / Creator:Wyman, Stacia K ; Parkin, Rachael K ; Mitchell, Patrick S ; Fritz, Brian R ; O'Briant, Kathy ; Godwin, Andrew K ; Urban, Nicole ; Drescher, Charles W ; Knudsen, Beatrice S ; Tewari, Muneesh
Publisher:United States: Public Library of Science
Journal title:PloS one, 2009-04, Vol.4 (4), p.e5311-e5311
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Deep learning-based image analysis methods for brightfield-acquired multiplex immunohistochemistry images
Author / Creator:Fassler, Danielle J ; Abousamra, Shahira ; Gupta, Rajarsi ; Chen, Chao ; Zhao, Maozheng ; Paredes, David ; Batool, Syeda Areeha ; Knudsen, Beatrice S ; Escobar-Hoyos, Luisa ; Shroyer, Kenneth R ; Samaras, Dimitris ; Kurc, Tahsin ; Saltz, Joel
Publisher:England: BioMed Central Ltd
Journal title:Diagnostic pathology, 2020-07, Vol.15 (1), p.100-100, Article 100
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A novel machine learning approach reveals latent vascular phenotypes predictive of renal cancer outcome
Author / Creator:Ing, Nathan ; Huang, Fangjin ; Conley, Andrew ; You, Sungyong ; Ma, Zhaoxuan ; Klimov, Sergey ; Ohe, Chisato ; Yuan, Xiaopu ; Amin, Mahul B. ; Figlin, Robert ; Gertych, Arkadiusz ; Knudsen, Beatrice S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-10, Vol.7 (1), p.13190-10, Article 13190
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ArticlesPeer ReviewedFull Text
Mutant POLQ and POLZ/REV3L DNA polymerases may contribute to the favorable survival of patients with tumors with POLE mutations outside the exonuclease domain
Author / Creator:Huang, Fangjin ; Tanaka, Hisashi ; Knudsen, Beatrice S ; Rutgers, Joanne K
Publisher:England: BioMed Central Ltd
Journal title:BMC medical genetics, 2020-08, Vol.21 (1), p.167-167, Article 167
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Chromosomal instability in untreated primary prostate cancer as an indicator of metastatic potential
Author / Creator:Miller, Eric T ; You, Sungyong ; Cadaneanu, Radu M ; Kim, Minhyung ; Yoon, Junhee ; Liu, Sandy T ; Li, Xinmin ; Kwan, Lorna ; Hodge, Jennelle ; Quist, Michael J ; Grasso, Catherine S ; Lewis, Michael S ; Knudsen, Beatrice S ; Freeman, Michael R ; Garraway, Isla P
Publisher:England: BioMed Central Ltd
Journal title:BMC cancer, 2020-05, Vol.20 (1), p.398-398, Article 398
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ArticlesPeer ReviewedFull Text
DNA methylation profiles of ovarian epithelial carcinoma tumors and cell lines
Author / Creator:Houshdaran, Sahar ; Hawley, Sarah ; Palmer, Chana ; Campan, Mihaela ; Olsen, Mari N ; Ventura, Aviva P ; Knudsen, Beatrice S ; Drescher, Charles W ; Urban, Nicole D ; Brown, Patrick O ; Laird, Peter W
Publisher:United States: Public Library of Science
Journal title:PloS one, 2010-02, Vol.5 (2), p.e9359-e9359
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ArticlesPeer ReviewedFull Text
Data integration from pathology slides for quantitative imaging of multiple cell types within the tumor immune cell infiltrate
Author / Creator:Ma, Zhaoxuan ; Shiao, Stephen L ; Yoshida, Emi J ; Swartwood, Steven ; Huang, Fangjin ; Doche, Michael E ; Chung, Alice P ; Knudsen, Beatrice S ; Gertych, Arkadiusz
Publisher:England: BioMed Central Ltd
Journal title:Diagnostic pathology, 2017-09, Vol.12 (1), p.69-69, Article 69
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Keratin 13 Is Enriched in Prostate Tubule-Initiating Cells and May Identify Primary Prostate Tumors that Metastasize to the Bone
Author / Creator:Liu, Sandy ; Cadaneanu, Radu M ; Zhang, Baohui ; Huo, Lihong ; Lai, Kevin ; Li, Xinmin ; Galet, Colette ; Grogan, Tristan R ; Elashoff, David ; Freedland, Stephen J ; Rettig, Matthew ; Aronson, William J ; Knudsen, Beatrice S ; Lewis, Michael S ; Garraway, Isla P
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-10, Vol.11 (10), p.e0163232-e0163232
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A Non-integrating Lentiviral Approach Overcomes Cas9-Induced Immune Rejection to Establish an Immunocompetent Metastatic Renal Cancer Model
Author / Creator:Hu, Junhui ; Schokrpur, Shiruyeh ; Archang, Maani ; Hermann, Kip ; Sharrow, Allison C ; Khanna, Prateek ; Novak, Jesse ; Signoretti, Sabina ; Bhatt, Rupal S ; Knudsen, Beatrice S ; Xu, Hua ; Wu, Lily
Publisher:United States: Elsevier Limited
Journal title:Molecular therapy. Methods & clinical development, 2018-06, Vol.9, p.203-210
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ArticlesPeer ReviewedFull Text
Proteomic analysis of ovarian cancer cells reveals dynamic processes of protein secretion and shedding of extra-cellular domains
Author / Creator:Faça, Vitor M ; Ventura, Aviva P ; Fitzgibbon, Mathew P ; Pereira-Faça, Sandra R ; Pitteri, Sharon J ; Green, Ann E ; Ireton, Renee C ; Zhang, Qing ; Wang, Hong ; O'Briant, Kathy C ; Drescher, Charles W ; Schummer, Michèl ; McIntosh, Martin W ; Knudsen, Beatrice S ; Hanash, Samir M
Publisher:United States: Public Library of Science
Journal title:PloS one, 2008-06, Vol.3 (6), p.e2425-e2425
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ArticlesPeer ReviewedFull Text
Proliferation and Invasion: Plasticity in Tumor Cells
Author / Creator:Gao, Chong-Feng ; Xie, Qian ; Su, Yan-Li ; Koeman, Julie ; Khoo, Sok Kean ; Gustafson, Margaret ; Knudsen, Beatrice S. ; Hay, Rick ; Shinomiya, Nariyoshi ; George F. Vande Woude
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2005-07, Vol.102 (30), p.10528-10533
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ArticlesPeer ReviewedFull Text
Publisher Correction to: Deep learning-based image analysis methods for brightfield-acquired multiplex immunohistochemistry images
Author / Creator:Fassler, Danielle J ; Abousamra, Shahira ; Gupta, Rajarsi ; Chen, Chao ; Zhao, Maozheng ; Paredes, David ; Batool, Syeda Areeha ; Knudsen, Beatrice S ; Escobar-Hoyos, Luisa ; Shroyer, Kenneth R ; Samaras, Dimitris ; Kurc, Tahsin ; Saltz, Joel
Publisher:England: BioMed Central Ltd
Journal title:Diagnostic pathology, 2020-09, Vol.15 (1), p.116-116, Article 116
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ONECUT2 is a targetable master regulator of lethal prostate cancer that suppresses the androgen axis
Author / Creator:Rotinen, Mirja ; You, Sungyong ; Yang, Julie ; Coetzee, Simon G. ; Reis-Sobreiro, Mariana ; Huang, Wen-Chin ; Huang, Fangjin ; Pan, Xinlei ; Yáñez, Alberto ; Hazelett, Dennis J. ; Chu, Chia-Yi ; Steadman, Kenneth ; Morrissey, Colm M. ; Nelson, Peter S. ; Corey, Eva ; Chung, Leland W. K. ; Freedland, Stephen J. ; Di Vizio, Dolores ; Garraway, Isla P. ; Murali, Ramachandran ; Knudsen, Beatrice S. ; Freeman, Michael R.
Publisher:New York: Nature Publishing Group US
Journal title:Nature medicine, 2018-12, Vol.24 (12), p.1887-1898
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A precision oncology approach to the pharmacological targeting of mechanistic dependencies in neuroendocrine tumors
Author / Creator:Alvarez, Mariano J. ; Subramaniam, Prem S. ; Tang, Laura H. ; Grunn, Adina ; Aburi, Mahalaxmi ; Rieckhof, Gabrielle ; Komissarova, Elena V. ; Hagan, Elizabeth A. ; Bodei, Lisa ; Clemons, Paul A. ; Dela Cruz, Filemon S. ; Dhall, Deepti ; Diolaiti, Daniel ; Fraker, Douglas A. ; Ghavami, Afshin ; Kaemmerer, Daniel ; Karan, Charles ; Kidd, Mark ; Kim, Kyoung M. ; Kim, Hee C. ; Kunju, Lakshmi P. ; Langel, Ülo ; Li, Zhong ; Lee, Jeeyun ; Li, Hai ; LiVolsi, Virginia ; Pfragner, Roswitha ; Rainey, Allison R. ; Realubit, Ronald B. ; Remotti, Helen ; Regberg, Jakob ; Roses, Robert ; Rustgi, Anil ; Sepulveda, Antonia R. ; Serra, Stefano ; Shi, Chanjuan ; Yuan, Xiaopu ; Barberis, Massimo ; Bergamaschi, Roberto ; Chinnaiyan, Arul M. ; Detre, Tony ; Ezzat, Shereen ; Frilling, Andrea ; Hommann, Merten ; Jaeger, Dirk ; Kim, Michelle K. ; Knudsen, Beatrice S. ; Kung, Andrew L. ; Leahy, Emer ; Metz, David C. ; Milsom, Jeffrey W. ; Park, Young S. ; Reidy-Lagunes, Diane ; Schreiber, Stuart ; Washington, Kay ; Wiedenmann, Bertram ; Modlin, Irvin ; Califano, Andrea
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2018-07, Vol.50 (7), p.979-989
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Knudsen, Beatrice S

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Knudsen, Beatrice S

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Convolutional neural networks can accurately distinguish four histologic growth patterns of lung adenocarcinoma in digital slides

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Circulating microRNAs as stable blood-based markers for cancer detection

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Receptor-interacting protein kinase 2 (RIPK2) stabilizes c-Myc and is a therapeutic target in prostate cancer metastasis

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Circulating microRNA profiling identifies a subset of metastatic prostate cancer patients with evidence of cancer-associated hypoxia

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Repertoire of microRNAs in epithelial ovarian cancer as determined by next generation sequencing of small RNA cDNA libraries

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Deep learning-based image analysis methods for brightfield-acquired multiplex immunohistochemistry images

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A novel machine learning approach reveals latent vascular phenotypes predictive of renal cancer outcome

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Mutant POLQ and POLZ/REV3L DNA polymerases may contribute to the favorable survival of patients with tumors with POLE mutations outside the exonuclease domain

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Chromosomal instability in untreated primary prostate cancer as an indicator of metastatic potential

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DNA methylation profiles of ovarian epithelial carcinoma tumors and cell lines

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Data integration from pathology slides for quantitative imaging of multiple cell types within the tumor immune cell infiltrate

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Keratin 13 Is Enriched in Prostate Tubule-Initiating Cells and May Identify Primary Prostate Tumors that Metastasize to the Bone

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A Non-integrating Lentiviral Approach Overcomes Cas9-Induced Immune Rejection to Establish an Immunocompetent Metastatic Renal Cancer Model

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Proteomic analysis of ovarian cancer cells reveals dynamic processes of protein secretion and shedding of extra-cellular domains

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Proliferation and Invasion: Plasticity in Tumor Cells

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Publisher Correction to: Deep learning-based image analysis methods for brightfield-acquired multiplex immunohistochemistry images

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ONECUT2 is a targetable master regulator of lethal prostate cancer that suppresses the androgen axis

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A precision oncology approach to the pharmacological targeting of mechanistic dependencies in neuroendocrine tumors

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