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Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity
Author / Creator:Liu, Longqi ; Liu, Chuanyu ; Quintero, Andrés ; Wu, Liang ; Yuan, Yue ; Wang, Mingyue ; Cheng, Mengnan ; Leng, Lizhi ; Xu, Liqin ; Dong, Guoyi ; Li, Rui ; Liu, Yang ; Wei, Xiaoyu ; Xu, Jiangshan ; Chen, Xiaowei ; Lu, Haorong ; Chen, Dongsheng ; Wang, Quanlei ; Zhou, Qing ; Lin, Xinxin ; Li, Guibo ; Liu, Shiping ; Wang, Qi ; Wang, Hongru ; Fink, J. Lynn ; Gao, Zhengliang ; Liu, Xin ; Hou, Yong ; Zhu, Shida ; Yang, Huanming ; Ye, Yunming ; Lin, Ge ; Chen, Fang ; Herrmann, Carl ; Eils, Roland ; Shang, Zhouchun ; Xu, Xun
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2019-01, Vol.10 (1), p.470-470, Article 470
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Whole-genome resequencing of 445 Lactuca accessions reveals the domestication history of cultivated lettuce
Author / Creator:Wei, Tong ; van Treuren, Rob ; Liu, Xinjiang ; Zhang, Zhaowu ; Chen, Jiongjiong ; Liu, Yang ; Dong, Shanshan ; Sun, Peinan ; Yang, Ting ; Lan, Tianming ; Wang, Xiaogang ; Xiong, Zhouquan ; Liu, Yaqiong ; Wei, Jinpu ; Lu, Haorong ; Han, Shengping ; Chen, Jason C. ; Ni, Xuemei ; Wang, Jian ; Yang, Huanming ; Xu, Xun ; Kuang, Hanhui ; van Hintum, Theo ; Liu, Xin ; Liu, Huan
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2021-05, Vol.53 (5), p.752-760
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Single cell atlas for 11 non-model mammals, reptiles and birds
Author / Creator:Chen, Dongsheng ; Sun, Jian ; Zhu, Jiacheng ; Ding, Xiangning ; Lan, Tianming ; Wang, Xiran ; Wu, Weiying ; Ou, Zhihua ; Zhu, Linnan ; Ding, Peiwen ; Wang, Haoyu ; Luo, Lihua ; Xiang, Rong ; Wang, Xiaoling ; Qiu, Jiaying ; Wang, Shiyou ; Li, Haimeng ; Chai, Chaochao ; Liang, Langchao ; An, Fuyu ; Zhang, Le ; Han, Lei ; Zhu, Yixin ; Wang, Feiyue ; Yuan, Yuting ; Wu, Wendi ; Sun, Chengcheng ; Lu, Haorong ; Wu, Jihong ; Sun, Xinghuai ; Zhang, Shenghai ; Sahu, Sunil Kumar ; Liu, Ping ; Xia, Jun ; Zhang, Lijing ; Chen, Haixia ; Fang, Dongming ; Zeng, Yuying ; Wu, Yiquan ; Cui, Zehua ; He, Qian ; Jiang, Sanjie ; Ma, Xiaoyan ; Feng, Weimin ; Xu, Yan ; Li, Fang ; Liu, Zhongmin ; Chen, Lei ; Chen, Fang ; Jin, Xin ; Qiu, Wei ; Wang, Tianjiao ; Li, Yang ; Xing, Xiumei ; Yang, Huanming ; Xu, Yanchun ; Hua, Yan ; Liu, Yahong ; Liu, Huan ; Xu, Xun
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-12, Vol.12 (1), p.7083-17, Article 7083
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Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study
Author / Creator:Foox, Jonathan ; Tighe, Scott W. ; Nicolet, Charles M. ; Zook, Justin M. ; Byrska-Bishop, Marta ; Clarke, Wayne E. ; Khayat, Michael M. ; Mahmoud, Medhat ; Laaguiby, Phoebe K. ; Herbert, Zachary T. ; Warner, Derek ; Grills, George S. ; Jen, Jin ; Levy, Shawn ; Xiang, Jenny ; Alonso, Alicia ; Zhao, Xia ; Zhang, Wenwei ; Teng, Fei ; Zhao, Yonggang ; Lu, Haorong ; Schroth, Gary P. ; Narzisi, Giuseppe ; Farmerie, William ; Sedlazeck, Fritz J. ; Baldwin, Don A. ; Mason, Christopher E.
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2021-09, Vol.39 (9), p.1129-1140
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African Orphan Crops Consortium (AOCC): status of developing genomic resources for African orphan crops
Author / Creator:Hendre, Prasad S. ; Muthemba, Samuel ; Kariba, Robert ; Muchugi, Alice ; Fu, Yuan ; Chang, Yue ; Song, Bo ; Liu, Huan ; Liu, Min ; Liao, Xuezhu ; Sahu, Sunil Kumar ; Wang, Sibo ; Li, Linzhou ; Lu, Haorong ; Peng, Shufeng ; Cheng, Shifeng ; Xu, Xun ; Yang, Huanming ; Wang, Jian ; Liu, Xin ; Simons, Anthony ; Shapiro, Howard-Yana ; Mumm, Rita H. ; Van Deynze, Allen ; Jamnadass, Ramni
Publisher:Berlin/Heidelberg: Springer Science + Business Media
Journal title:Planta, 2019-09, Vol.250 (3), p.989-1003
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Metagenome-genome-wide association studies reveal human genetic impact on the oral microbiome
Author / Creator:Liu, Xiaomin ; Tong, Xin ; Zhu, Jie ; Tian, Liu ; Jie, Zhuye ; Zou, Yuanqiang ; Lin, Xiaoqian ; Liang, Hewei ; Li, Wenxi ; Ju, Yanmei ; Qin, Youwen ; Zou, Leying ; Lu, Haorong ; Zhu, Shida ; Jin, Xin ; Xu, Xun ; Yang, Huanming ; Wang, Jian ; Zong, Yang ; Liu, Weibin ; Hou, Yong ; Jia, Huijue ; Zhang, Tao
Publisher:Singapore: Springer Singapore
Journal title:Cell discovery, 2021-12, Vol.7 (1), p.117-117, Article 117
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Single‐Nucleus RNA Sequencing and Spatial Transcriptomics Reveal the Immunological Microenvironment of Cervical Squamous Cell Carcinoma
Author / Creator:Ou, Zhihua ; Lin, Shitong ; Qiu, Jiaying ; Ding, Wencheng ; Ren, Peidi ; Chen, Dongsheng ; Wang, Jiaxuan ; Tong, Yihan ; Wu, Di ; Chen, Ao ; Deng, Yuan ; Cheng, Mengnan ; Peng, Ting ; Lu, Haorong ; Yang, Huanming ; Wang, Jian ; Jin, Xin ; Ma, Ding ; Xu, Xun ; Wang, Yanzhou ; Li, Junhua ; Wu, Peng
Publisher:Germany: John Wiley & Sons, Inc
Journal title:Advanced science, 2022-10, Vol.9 (29), p.e2203040-n/a
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Integrated large-scale metagenome assembly and multi-kingdom network analyses identify sex differences in the human nasal microbiome
Author / Creator:Ju, Yanmei ; Zhang, Zhe ; Liu, Mingliang ; Lin, Shutian ; Sun, Qiang ; Song, Zewei ; Liang, Weiting ; Tong, Xin ; Jie, Zhuye ; Lu, Haorong ; Cai, Kaiye ; Chen, Peishan ; Jin, Xin ; Zhang, Wenwei ; Xu, Xun ; Yang, Huanming ; Wang, Jian ; Hou, Yong ; Xiao, Liang ; Jia, Huijue ; Zhang, Tao ; Guo, Ruijin
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2024-10, Vol.25 (1), p.257-257, Article 257
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Single-nucleus and spatial transcriptomics identify brain landscape of gene regulatory networks associated with behavioral maturation in honeybees
Author / Creator:Mu, Xiaohuan ; Zhang, Zijing ; Liu, Qun ; Ma, Jie ; Qin, Yating ; Lang, Haoyu ; Zhang, Yingying ; Zhang, Nannan ; Guo, Qunfei ; Zhang, Pei ; Li, Denghui ; Zhang, Ruihua ; Ji, Qianyue ; Jiang, Aijun ; Wang, Yang ; Pan, Shanshan ; Liu, Xiawei ; Liu, Xuemei ; Sun, Jiahui ; Liu, Yan ; Chen, Hao ; Zheng, Li ; Meng, Liang ; Lu, Haorong ; Zhang, He ; Zhai, Yifan ; Li, Qiye ; Liu, Junnian ; Yang, Huanming ; Wang, Jian ; Hu, Xiaosong ; Xu, Xun ; Liu, Shanshan ; Zheng, Hao
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2025-04, Vol.16 (1), p.3343-16, Article 3343
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Equus roundworms (Parascaris univalens) are undergoing rapid divergence while genes involved in metabolic as well as anthelminic resistance are under positive selection
Author / Creator:Han, Lei ; Lan, Tianming ; Lu, Yaxian ; Zhou, Mengchao ; Li, Haimeng ; Lu, Haorong ; Wang, Qing ; Li, Xiuyun ; Du, Shan ; Guan, Chunyu ; Zhang, Yong ; Sahu, Sunil Kumar ; Qian, Puyi ; Zhang, Shaofang ; Zhou, Hongcheng ; Guo, Wei ; Chai, Hongliang ; Wang, Sibo ; Liu, Quan ; Liu, Huan ; Hou, Zhijun
Publisher:London: BioMed Central Ltd
Journal title:BMC genomics, 2022-07, Vol.23 (1), p.1-489, Article 489
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Single-nucleus transcriptome inventory of giant panda reveals cellular basis for fitness optimization under low metabolism
Author / Creator:Yang, Shangchen ; Lan, Tianming ; Wei, Rongping ; Zhang, Ling ; Lin, Lin ; Du, Hanyu ; Huang, Yunting ; Zhang, Guiquan ; Huang, Shan ; Shi, Minhui ; Wang, Chengdong ; Wang, Qing ; Li, Rengui ; Han, Lei ; Tang, Dan ; Li, Haimeng ; Zhang, Hemin ; Cui, Jie ; Lu, Haorong ; Huang, Jinrong ; Luo, Yonglun ; Li, Desheng ; Wan, Qiu-Hong ; Liu, Huan ; Fang, Sheng-Guo
Publisher:London: BioMed Central Ltd
Journal title:BMC biology, 2023-10, Vol.21 (1), p.1-222, Article 222
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Author Correction: Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study
Author / Creator:Foox, Jonathan ; Tighe, Scott W. ; Nicolet, Charles M. ; Zook, Justin M. ; Byrska-Bishop, Marta ; Clarke, Wayne E. ; Khayat, Michael M. ; Mahmoud, Medhat ; Laaguiby, Phoebe K. ; Herbert, Zachary T. ; Warner, Derek ; Grills, George S. ; Jen, Jin ; Levy, Shawn ; Xiang, Jenny ; Alonso, Alicia ; Zhao, Xia ; Zhang, Wenwei ; Teng, Fei ; Zhao, Yonggang ; Lu, Haorong ; Schroth, Gary P. ; Narzisi, Giuseppe ; Farmerie, William ; Sedlazeck, Fritz J. ; Baldwin, Don A. ; Mason, Christopher E.
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2021-11, Vol.39 (11), p.1466-1466
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Integrated Human Skin Bacteria Genome Catalog Reveals Extensive Unexplored Habitat‐Specific Microbiome Diversity and Function
Author / Creator:Li, Zhiming ; Ju, Yanmei ; Xia, Jingjing ; Zhang, Zhe ; Zhen, Hefu ; Tong, Xin ; Sun, Yuzhe ; Lu, Haorong ; Zong, Yang ; Chen, Peishan ; Cai, Kaiye ; Wang, Zhen ; Yang, Huanming ; Wang, Jiucun ; Wang, Jian ; Hou, Yong ; Jin, Xin ; Zhang, Tao ; Zhang, Wenwei ; Xu, Xun ; Xiao, Liang ; Guo, Ruijin ; Nie, Chao
Publisher:Germany: John Wiley & Sons, Inc
Journal title:Advanced science, 2023-10, Vol.10 (28), p.e2300050-n/a
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A genome-wide association study reveals the relationship between human genetic variation and the nasal microbiome
Author / Creator:Liu, Xiaomin ; Tong, Xin ; Zou, Leying ; Ju, Yanmei ; Liu, Mingliang ; Han, Mo ; Lu, Haorong ; Yang, Huanming ; Wang, Jian ; Zong, Yang ; Liu, Weibin ; Xu, Xun ; Jin, Xin ; Xiao, Liang ; Jia, Huijue ; Guo, Ruijin ; Zhang, Tao
Publisher:London: Nature Publishing Group UK
Journal title:Communications biology, 2024-01, Vol.7 (1), p.139-139, Article 139
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Genetic Diversity and Population Structure Analysis of Hollyhock (Alcea rosea Cavan) Using High-Throughput Sequencing
Author / Creator:Wang, Yue ; Zhao, Sheng ; Chen, Peng ; Liu, Yongkang ; Ma, Zhigang ; Malik, Waqar Afzal ; Zhu, Zhenghang ; Peng, Zhenyu ; Lu, Haorong ; Chen, Yanli ; Chang, Yuxiao
Publisher:Basel: MDPI AG
Journal title:Horticulturae, 2023-06, Vol.9 (6), p.662
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A pilot study of assessing whole genome sequencing in newborn screening in unselected children in China
Author / Creator:Jian, Min ; Wang, Xiaohong ; Sui, Yuanyuan ; Fang, Mingyan ; Feng, Chenchen ; Huang, Yingping ; Liu, Chunhua ; Guo, Ruidong ; Guan, Yuanning ; Gao, Yuxiao ; Wang, Zhiwei ; Li, Shuli ; Cheng, Bochen ; Sun, Lina ; Cui, Fenghua ; Guo, Jia ; Zhan, Ying ; Zhang, Guohong ; Zheng, Ling ; Su, Fengxia ; Xue, Wei ; Qian, Puyi ; Gao, Shaobo ; Chen, Jiayu ; Guan, Lingyao ; Lu, Haorong ; Kristiansen, Karsten ; Jin, Xin ; Chen, Fang ; Zhao, Yuhuan ; Hammarström, Lennart ; Jiang, Xiaojing ; Liu, Junnian ; Gao, Ya
Publisher:United States: John Wiley & Sons, Inc
Journal title:Clinical and translational medicine, 2022-06, Vol.12 (6), p.e843-n/a
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Mendelian randomization analyses support causal relationships between blood metabolites and the gut microbiome
Author / Creator:Liu, Xiaomin ; Tong, Xin ; Zou, Yuanqiang ; Lin, Xiaoqian ; Zhao, Hui ; Tian, Liu ; Jie, Zhuye ; Wang, Qi ; Zhang, Zhe ; Lu, Haorong ; Xiao, Liang ; Qiu, Xuemei ; Zi, Jin ; Wang, Rong ; Xu, Xun ; Yang, Huanming ; Wang, Jian ; Zong, Yang ; Liu, Weibin ; Hou, Yong ; Zhu, Shida ; Jia, Huijue ; Zhang, Tao
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2022-01, Vol.54 (1), p.52-61
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Cell transcriptomic atlas of the non-human primate Macaca fascicularis
Author / Creator:Han, Lei ; Wei, Xiaoyu ; Liu, Chuanyu ; Volpe, Giacomo ; Zhuang, Zhenkun ; Zou, Xuanxuan ; Wang, Zhifeng ; Pan, Taotao ; Yuan, Yue ; Zhang, Xiao ; Fan, Peng ; Guo, Pengcheng ; Lai, Yiwei ; Lei, Ying ; Liu, Xingyuan ; Yu, Feng ; Shangguan, Shuncheng ; Lai, Guangyao ; Deng, Qiuting ; Liu, Ya ; Wu, Liang ; Shi, Quan ; Yu, Hao ; Huang, Yunting ; Cheng, Mengnan ; Xu, Jiangshan ; Liu, Yang ; Wang, Mingyue ; Wang, Chunqing ; Zhang, Yuanhang ; Xie, Duo ; Yang, Yunzhi ; Yu, Yeya ; Zheng, Huiwen ; Wei, Yanrong ; Huang, Fubaoqian ; Lei, Junjie ; Huang, Waidong ; Zhu, Zhiyong ; Lu, Haorong ; Wang, Bo ; Wei, Xiaofeng ; Chen, Fengzhen ; Yang, Tao ; Du, Wensi ; Chen, Jing ; Xu, Shibo ; An, Juan ; Ward, Carl ; Wang, Zongren ; Pei, Zhong ; Wong, Chi-Wai ; Liu, Xiaolei ; Zhang, Huafeng ; Liu, Mingyuan ; Qin, Baoming ; Schambach, Axel ; Isern, Joan ; Feng, Liqiang ; Liu, Yan ; Guo, Xiangyu ; Liu, Zhen ; Sun, Qiang ; Maxwell, Patrick H. ; Barker, Nick ; Muñoz-Cánoves, Pura ; Gu, Ying ; Mulder, Jan ; Uhlen, Mathias ; Tan, Tao ; Liu, Shiping ; Yang, Huanming ; Wang, Jian ; Hou, Yong ; Xu, Xun ; Esteban, Miguel A. ; Liu, Longqi
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2022-04, Vol.604 (7907), p.723-731
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Genomic and transcriptomic analysis unveils population evolution and development of pesticide resistance in fall armyworm Spodoptera frugiperda
Author / Creator:Gui, Furong ; Lan, Tianming ; Zhao, Yue ; Guo, Wei ; Dong, Yang ; Fang, Dongming ; Liu, Huan ; Li, Haimeng ; Wang, Hongli ; Hao, Ruoshi ; Cheng, Xiaofang ; Li, Yahong ; Yang, Pengcheng ; Sahu, Sunil Kumar ; Chen, Yaping ; Cheng, Le ; He, Shuqi ; Liu, Ping ; Fan, Guangyi ; Lu, Haorong ; Hu, Guohai ; Dong, Wei ; Chen, Bin ; Jiang, Yuan ; Zhang, Yongwei ; Xu, Hanhong ; Lin, Fei ; Slipper, Bernard ; Postma, Alisa ; Jackson, Matthew ; Abate, Birhan Addisie ; Tesfaye, Kassahun ; Demie, Aschalew Lemma ; Bayeleygne, Meseret Destaw ; Degefu, Dawit Tesfaye ; Chen, Feng ; Kuria, Paul K. ; Kinyua, Zachary M. ; Liu, Tong-Xian ; Yang, Huanming ; Huang, Fangneng ; Liu, Xin ; Sheng, Jun ; Kang, Le
Publisher:Beijing: Higher Education Press
Journal title:Protein & cell, 2022-07, Vol.13 (7), p.513-531
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Whole-genome sequencing of 175 Mongolians uncovers population-specific genetic architecture and gene flow throughout North and East Asia
Author / Creator:Bai, Haihua ; Guo, Xiaosen ; Narisu, Narisu ; Lan, Tianming ; Wu, Qizhu ; Xing, Yanping ; Zhang, Yong ; Bond, Stephen R. ; Pei, Zhili ; Zhang, Yanru ; Zhang, Dandan ; Jirimutu, Jirimutu ; Zhang, Dong ; Yang, Xukui ; Morigenbatu, Morigenbatu ; Zhang, Li ; Ding, Bingyi ; Guan, Baozhu ; Cao, Junwei ; Lu, Haorong ; Liu, Yiyi ; Li, Wangsheng ; Dang, Ningxin ; Jiang, Mingyang ; Wang, Shenyuan ; Xu, Huixin ; Wang, Dingzhu ; Liu, Chunxia ; Luo, Xin ; Gao, Ying ; Li, Xueqiong ; Wu, Zongze ; Yang, Liqing ; Meng, Fanhua ; Ning, Xiaolian ; Hashenqimuge, Hashenqimuge ; Wu, Kaifeng ; Wang, Bo ; Suyalatu, Suyalatu ; Liu, Yingchun ; Ye, Chen ; Wu, Huiguang ; Leppälä, Kalle ; Li, Lu ; Fang, Lin ; Chen, Yujie ; Xu, Wenhao ; Li, Tao ; Liu, Xin ; Xu, Xun ; Gignoux, Christopher R. ; Yang, Huanming ; Brody, Lawrence C. ; Wang, Jun ; Kristiansen, Karsten ; Burenbatu, Burenbatu ; Zhou, Huanmin ; Yin, Ye
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2018-12, Vol.50 (12), p.1696-1704
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Showing 1 to 20 of 38 results

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Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

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Whole-genome resequencing of 445 Lactuca accessions reveals the domestication history of cultivated lettuce

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Single cell atlas for 11 non-model mammals, reptiles and birds

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Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study

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African Orphan Crops Consortium (AOCC): status of developing genomic resources for African orphan crops

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Metagenome-genome-wide association studies reveal human genetic impact on the oral microbiome

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Single‐Nucleus RNA Sequencing and Spatial Transcriptomics Reveal the Immunological Microenvironment of Cervical Squamous Cell Carcinoma

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Integrated large-scale metagenome assembly and multi-kingdom network analyses identify sex differences in the human nasal microbiome

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Single-nucleus and spatial transcriptomics identify brain landscape of gene regulatory networks associated with behavioral maturation in honeybees

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Equus roundworms (Parascaris univalens) are undergoing rapid divergence while genes involved in metabolic as well as anthelminic resistance are under positive selection

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Single-nucleus transcriptome inventory of giant panda reveals cellular basis for fitness optimization under low metabolism

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Author Correction: Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study

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Integrated Human Skin Bacteria Genome Catalog Reveals Extensive Unexplored Habitat‐Specific Microbiome Diversity and Function

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A genome-wide association study reveals the relationship between human genetic variation and the nasal microbiome

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Genetic Diversity and Population Structure Analysis of Hollyhock (Alcea rosea Cavan) Using High-Throughput Sequencing

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A pilot study of assessing whole genome sequencing in newborn screening in unselected children in China

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Mendelian randomization analyses support causal relationships between blood metabolites and the gut microbiome

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Cell transcriptomic atlas of the non-human primate Macaca fascicularis

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Genomic and transcriptomic analysis unveils population evolution and development of pesticide resistance in fall armyworm Spodoptera frugiperda

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Whole-genome sequencing of 175 Mongolians uncovers population-specific genetic architecture and gene flow throughout North and East Asia

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