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71 results for Poly(A)+sites+usage

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ArticlesPeer ReviewedFull Text
Alternative polyadenylation: methods, mechanism, function, and role in cancer
Author / Creator:Zhang, Yi ; Liu, Lian ; Qiu, Qiongzi ; Zhou, Qing ; Ding, Jinwang ; Lu, Yan ; Liu, Pengyuan
Publisher:England: BioMed Central Ltd
Journal title:Journal of experimental & clinical cancer research, 2021-02, Vol.40 (1), p.51-51, Article 51
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ArticlesFull Text
DPAC: a tool for Differential Poly(A) Site usage from poly(A) targeted RNAseq data
Author / Creator:Routh, Andrew Laurence
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2019-01
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Newsletter articlesFull Text
Macrophage differentiation is marked by increased abundance of the mRNA 3' end processing machinery, altered poly(A) site usage, and sensitivity to the level of CstF64
Publisher:NewsRX LLC
Journal title:Health & Medicine Week, 2022, p.2744
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Newsletter articlesFull Text
Macrophage differentiation is marked by increased abundance of the mRNA 3' end processing machinery, altered poly(A) site usage, and sensitivity to the level of CstF64 (Updated November 14, 2022)
Publisher:NewsRX LLC
Journal title:Health & Medicine Week, 2022, p.2675
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Newsletter articlesFull Text
Research Study Findings from Tufts University School of Medicine Update Understanding of Immunology
Publisher:NewsRX LLC
Journal title:Health & Medicine Week, 2023, p.4864
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ArticlesPeer ReviewedFull Text
RNA polymerase II kinetics in polo polyadenylation signal selection
Author / Creator:Pinto, Pedro A B ; Henriques, Telmo ; Freitas, Marta O ; Martins, Torcato ; Domingues, Rita G ; Wyrzykowska, Paulina S ; Coelho, Paula A ; Carmo, Alexandre M ; Sunkel, Claudio E ; Proudfoot, Nicholas J ; Moreira, Alexandra
Publisher:Chichester, UK: John Wiley & Sons, Ltd
Journal title:The EMBO journal, 2011-06, Vol.30 (12), p.2431-2444
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ArticlesPeer ReviewedFull Text
Identification and Characterization of Transcripts Regulated by Circadian Alternative Polyadenylation in Mouse Liver
Author / Creator:Gendreau, Kerry L ; Unruh, Benjamin A ; Zhou, Chuanli ; Kojima, Shihoko
Publisher:Oxford: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2018-11, Vol.8 (11), p.3539-3548
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Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing in ovarian cancer
Author / Creator:Dondi, Arthur ; Lischetti, Ulrike ; Jacob, Francis ; Singer, Franziska ; Borgsmüller, Nico ; Coelho, Ricardo ; Heinzelmann-Schwarz, Viola ; Beisel, Christian ; Beerenwinkel, Niko
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-11, Vol.14 (1), p.7780-19, Article 7780
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ArticlesPeer ReviewedFull Text
CFIm25 links alternative polyadenylation to glioblastoma tumour suppression
Author / Creator:Masamha, Chioniso P. ; Xia, Zheng ; Yang, Jingxuan ; Albrecht, Todd R. ; Li, Min ; Shyu, Ann-Bin ; Li, Wei ; Wagner, Eric J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2014-06, Vol.510 (7505), p.412-416
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ArticlesPeer ReviewedFull Text
A comprehensive map of alternative polyadenylation in African American and European American lung cancer patients
Author / Creator:Zingone, Adriana ; Sinha, Sanju ; Ante, Michael ; Nguyen, Cu ; Daujotyte, Dalia ; Bowman, Elise D. ; Sinha, Neelam ; Mitchell, Khadijah A. ; Chen, Qingrong ; Yan, Chunhua ; Loher, Phillipe ; Meerzaman, Daoud ; Ruppin, Eytan ; Ryan, Bríd M.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-09, Vol.12 (1), p.5605-12, Article 5605
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ArticlesPeer ReviewedFull Text
Revisiting CPSF30-mediated alternative polyadenylation in Arabidopsis thaliana
Author / Creator:Hao, Guijie ; Zhou, Lichun ; Liu, Huazhen ; Kachroo, Pradeep ; Hunt, Arthur G
Publisher:United States: Public Library of Science
Journal title:PloS one, 2025-02, Vol.20 (2), p.e0319180
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ArticlesPeer ReviewedFull Text
Nucleotide-level linkage of transcriptional elongation and polyadenylation
Author / Creator:Geisberg, Joseph V ; Moqtaderi, Zarmik ; Fong, Nova ; Erickson, Benjamin ; Bentley, David L ; Struhl, Kevin
Publisher:England: eLife Science Publications, Ltd
Journal title:eLife, 2022-11, Vol.11
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ArticlesPeer ReviewedFull Text
Integrative genome-wide analysis reveals HLP1, a novel RNA-binding protein, regulates plant flowering by targeting alternative polyadenylation
Author / Creator:Zhang, Yong ; Gu, Lianfeng ; Hou, Yifeng ; Wang, Lulu ; Deng, Xian ; Hang, Runlai ; Chen, Dong ; Zhang, Xiansheng ; Zhang, Yi ; Liu, Chunyan ; Cao, Xiaofeng
Publisher:London: Nature Publishing Group UK
Journal title:Cell research, 2015-07, Vol.25 (7), p.864-876
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ArticlesPeer ReviewedFull Text
Identification of experimentally-supported poly(A) sites in single-cell RNA-seq data with SCINPAS
Author / Creator:Moon, Youngbin ; Burri, Dominik ; Zavolan, Mihaela
Publisher:Oxford: Oxford University Press
Journal title:NAR genomics and bioinformatics, 2023-09, Vol.5 (3), p.lqad079-lqad079
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ArticlesPeer ReviewedFull Text
Multi-omics analysis reveals the epitranscriptomic and proteomic regulation network of tomato in low-temperature stress response
Author / Creator:Wang, Na ; Li, Yanting ; Guo, Tianli ; Jiang, Libo
Publisher:Beijing: Elsevier B.V
Journal title:Horticultural plant journal, 2025-03, Vol.11 (2), p.758-773
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ArticlesPeer ReviewedFull Text
OR26-1 Alternative Polyadenylation as a Therapeutic Vulnerability in Prostate Cancer
Author / Creator:Dehm, Scott ; Miller, Jeffery ; Munro, Sarah ; Van Etten, Jamie ; Tietz, Kiel
Publisher:Oxford: Oxford University Press
Journal title:Journal of the Endocrine Society, 2022-11, Vol.6 (Supplement_1), p.A725-A725
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ArticlesPeer ReviewedFull Text
Biased alternative polyadenylation in human tissues
Author / Creator:Zhang, Haibo ; Lee, Ju Youn ; Tian, Bin
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology (Online Edition), 2005-01, Vol.6 (12), p.R100-R100, Article R100
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ArticlesPeer ReviewedFull Text
Systematic profiling of poly(A)+ transcripts modulated by core 3' end processing and splicing factors reveals regulatory rules of alternative cleavage and polyadenylation
Author / Creator:Li, Wencheng ; You, Bei ; Hoque, Mainul ; Zheng, Dinghai ; Luo, Wenting ; Ji, Zhe ; Park, Ji Yeon ; Gunderson, Samuel I ; Kalsotra, Auinash ; Manley, James L ; Tian, Bin
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2015-04, Vol.11 (4), p.e1005166-e1005166
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ArticlesPeer ReviewedFull Text
Poly(A) Site Choice Rather Than Splice Site Choice Governs the Regulated Production of IgM Heavy-Chain RNAs
Author / Creator:Galli, Gabriella ; Guise, Jeffrey ; Tucker, Phillip W. ; Nevins, Joseph R.
Publisher:Washington, DC: National Academy of Sciences of the United States of America
Journal title:Proceedings of the National Academy of Sciences - PNAS, 1988-04, Vol.85 (8), p.2439-2443
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ArticlesPeer ReviewedFull Text
DPAC: A Tool for Differential Poly(A)–Cluster Usage from Poly(A)–Targeted RNAseq Data
Author / Creator:Routh, Andrew
Publisher:Oxford: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2019-06, Vol.9 (6), p.1825-1830
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Alternative polyadenylation: methods, mechanism, function, and role in cancer

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DPAC: a tool for Differential Poly(A) Site usage from poly(A) targeted RNAseq data

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Macrophage differentiation is marked by increased abundance of the mRNA 3' end processing machinery, altered poly(A) site usage, and sensitivity to the level of CstF64

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Macrophage differentiation is marked by increased abundance of the mRNA 3' end processing machinery, altered poly(A) site usage, and sensitivity to the level of CstF64 (Updated November 14, 2022)

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Research Study Findings from Tufts University School of Medicine Update Understanding of Immunology

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RNA polymerase II kinetics in polo polyadenylation signal selection

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Identification and Characterization of Transcripts Regulated by Circadian Alternative Polyadenylation in Mouse Liver

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Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing in ovarian cancer

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CFIm25 links alternative polyadenylation to glioblastoma tumour suppression

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A comprehensive map of alternative polyadenylation in African American and European American lung cancer patients

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Revisiting CPSF30-mediated alternative polyadenylation in Arabidopsis thaliana

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Nucleotide-level linkage of transcriptional elongation and polyadenylation

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Integrative genome-wide analysis reveals HLP1, a novel RNA-binding protein, regulates plant flowering by targeting alternative polyadenylation

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Identification of experimentally-supported poly(A) sites in single-cell RNA-seq data with SCINPAS

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Multi-omics analysis reveals the epitranscriptomic and proteomic regulation network of tomato in low-temperature stress response

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OR26-1 Alternative Polyadenylation as a Therapeutic Vulnerability in Prostate Cancer

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Biased alternative polyadenylation in human tissues

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Systematic profiling of poly(A)+ transcripts modulated by core 3' end processing and splicing factors reveals regulatory rules of alternative cleavage and polyadenylation

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Poly(A) Site Choice Rather Than Splice Site Choice Governs the Regulated Production of IgM Heavy-Chain RNAs

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DPAC: A Tool for Differential Poly(A)–Cluster Usage from Poly(A)–Targeted RNAseq Data

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