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An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape
Author / Creator:Pokusaeva, Victoria O. ; Usmanova, Dinara R. ; Putintseva, Ekaterina V. ; Espinar, Lorena ; Sarkisyan, Karen S. ; Mishin, Alexander S. ; Bogatyreva, Natalya S. ; Ivankov, Dmitry N. ; Akopyan, Arseniy V. ; Avvakumov, Sergey Ya ; Povolotskaya, Inna S. ; Filion, Guillaume J. ; Carey, Lucas B. ; Kondrashov, Fyodor A.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2019-04, Vol.15 (4), p.e1008079
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KillerOrange, a Genetically Encoded Photosensitizer Activated by Blue and Green Light
Author / Creator:Sarkisyan, Karen S. ; Zlobovskaya, Olga A. ; Gorbachev, Dmitry A. ; Bozhanova, Nina G. ; Sharonov, George V. ; Staroverov, Dmitriy B. ; Egorov, Evgeny S. ; Ryabova, Anastasia V. ; Solntsev, Kyril M. ; Mishin, Alexander S. ; Lukyanov, Konstantin A.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-12, Vol.10 (12), p.e0145287
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Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics
Author / Creator:Akerboom, Jasper ; Carreras Calderón, Nicole ; Tian, Lin ; Wabnig, Sebastian ; Prigge, Matthias ; Tolö, Johan ; Gordus, Andrew ; Orger, Michael B. ; Severi, Kristen E. ; Macklin, John J. ; Patel, Ronak ; Pulver, Stefan R. ; Wardill, Trevor J. ; Fischer, Elisabeth ; Schüler, Christina ; Chen, Tsai-Wen ; Sarkisyan, Karen S. ; Marvin, Jonathan S. ; Bargmann, Cornelia I. ; Kim, Douglas S. ; Kügler, Sebastian ; Lagnado, Leon ; Hegemann, Peter ; Gottschalk, Alexander ; Schreiter, Eric R. ; Looger, Loren L.
Publisher:Switzerland: Frontiers Research Foundation
Journal title:Frontiers in molecular neuroscience, 2013-01, Vol.6, p.2-2
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Heterogeneity of the GFP fitness landscape and data-driven protein design
Author / Creator:Gonzalez Somermeyer, Louisa ; Fleiss, Aubin ; Mishin, Alexander S ; Bozhanova, Nina G ; Igolkina, Anna A ; Meiler, Jens ; Alaball Pujol, Maria-Elisenda ; Putintseva, Ekaterina V ; Sarkisyan, Karen S ; Kondrashov, Fyodor A
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2022-05, Vol.11
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Triple Reporter Assay: A Non-Overlapping Luciferase Assay for the Measurement of Complex Macromolecular Regulation in Cancer Cells Using a New Mushroom Luciferase–Luciferin Pair
Author / Creator:Mujawar, Aaiyas ; Phadte, Pratham ; Palkina, Ksenia ; Markina, Nadezhda ; Mohammad, Ameena ; Thakur, Bhushan ; Sarkisyan, Karen ; Balakireva, Anastasia ; Ray, Pritha ; Yampolsky, Ilia ; De, Abhijit
Publisher:Switzerland: MDPI AG
Journal title:Sensors (Basel, Switzerland), 2023-08, Vol.23 (17), p.7313
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Bioluminescence-Driven Optogenetics
Author / Creator:Sureda-Vives, Macià ; Sarkisyan, Karen S.
Publisher:Switzerland: MDPI AG
Journal title:Life (Basel, Switzerland), 2020-11, Vol.10 (12), p.318
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Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems
Author / Creator:Shakhova, Ekaterina S. ; Markina, Nadezhda M. ; Mitiouchkina, Tatiana ; Bugaeva, Evgenia N. ; Karataeva, Tatiana A. ; Palkina, Kseniia A. ; Fakhranurova, Liliia I. ; Yampolsky, Ilia V. ; Sarkisyan, Karen S. ; Mishin, Alexander S.
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2022-12, Vol.23 (23), p.15441
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Fluorescent Protein Based FRET Pairs with Improved Dynamic Range for Fluorescence Lifetime Measurements
Author / Creator:George Abraham, Bobin ; Sarkisyan, Karen S. ; Mishin, Alexander S. ; Santala, Ville ; Tkachenko, Nikolai V. ; Karp, Matti
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-08, Vol.10 (8), p.e0134436-e0134436
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A brief review of bioluminescent systems (2019)
Author / Creator:Fleiss, Aubin ; Sarkisyan, Karen S.
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Current genetics, 2019-08, Vol.65 (4), p.877-882
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Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore
Author / Creator:Pletneva, Nadya V. ; Pletnev, Vladimir Z. ; Sarkisyan, Karen S. ; Gorbachev, Dmitry A. ; Egorov, Evgeny S. ; Mishin, Alexander S. ; Lukyanov, Konstantin A. ; Dauter, Zbigniew ; Pletnev, Sergei
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-12, Vol.10 (12), p.e0145740
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Local fitness landscape of the green fluorescent protein
Author / Creator:Sarkisyan, Karen S. ; Bolotin, Dmitry A. ; Meer, Margarita V. ; Usmanova, Dinara R. ; Mishin, Alexander S. ; Sharonov, George V. ; Ivankov, Dmitry N. ; Bozhanova, Nina G. ; Baranov, Mikhail S. ; Soylemez, Onuralp ; Bogatyreva, Natalya S. ; Vlasov, Peter K. ; Egorov, Evgeny S. ; Logacheva, Maria D. ; Kondrashov, Alexey S. ; Chudakov, Dmitry M. ; Putintseva, Ekaterina V. ; Mamedov, Ilgar Z. ; Tawfik, Dan S. ; Lukyanov, Konstantin A. ; Kondrashov, Fyodor A.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2016-05, Vol.533 (7603), p.397-401
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Measuring Caenorhabditis elegans Spatial Foraging and Food Intake Using Bioluminescent Bacteria
Author / Creator:Ding, Siyu Serena ; Romenskyy, Maksym ; Sarkisyan, Karen S ; Brown, Andre E X
Publisher:United States: Oxford University Press
Journal title:Genetics (Austin), 2020-03, Vol.214 (3), p.577-587
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Genetically Encoded Red Photosensitizers with Enhanced Phototoxicity
Author / Creator:Gorbachev, Dmitry A. ; Staroverov, Dmitry B. ; Lukyanov, Konstantin A. ; Sarkisyan, Karen S.
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2020-11, Vol.21 (22), p.8800
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FUCCI-Red: a single-color cell cycle indicator for fluorescence lifetime imaging
Author / Creator:Shirmanova, Marina V. ; Gorbachev, Dmitry A. ; Sarkisyan, Karen S. ; Parnes, Alina P. ; Gavrina, Alena I. ; Polozova, Anastasia V. ; Kovaleva, Tatyana F. ; Snopova, Ludmila B. ; Dudenkova, Varvara V. ; Zagaynova, Elena V. ; Lukyanov, Konstantin A.
Publisher:Cham: Springer International Publishing
Journal title:Cellular and molecular life sciences : CMLS, 2021-04, Vol.78 (7), p.3467-3476
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An improved pathway for autonomous bioluminescence imaging in eukaryotes
Author / Creator:Shakhova, Ekaterina S. ; Karataeva, Tatiana A. ; Markina, Nadezhda M. ; Mitiouchkina, Tatiana ; Palkina, Kseniia A. ; Perfilov, Maxim M. ; Wood, Monika G. ; Hoang, Trish T. ; Hall, Mary P. ; Fakhranurova, Liliia I. ; Alekberova, Anna E. ; Malyshevskaia, Alena K. ; Gorbachev, Dmitry A. ; Bugaeva, Evgenia N. ; Pletneva, Ludmila K. ; Babenko, Vladislav V. ; Boldyreva, Daria I. ; Gorokhovatsky, Andrey Y. ; Balakireva, Anastasia V. ; Gao, Feng ; Choob, Vladimir V. ; Encell, Lance P. ; Wood, Keith V. ; Yampolsky, Ilia V. ; Sarkisyan, Karen S. ; Mishin, Alexander S.
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2024-03, Vol.21 (3), p.406-410
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Domain Truncation in Hispidin Synthase Orthologs from Non-Bioluminescent Fungi Does Not Lead to Hispidin Biosynthesis
Author / Creator:Palkina, Kseniia A. ; Balakireva, Anastasia V. ; Belozerova, Olga A. ; Chepurnykh, Tatiana V. ; Markina, Nadezhda M. ; Kovalchuk, Sergey I. ; Tsarkova, Aleksandra S. ; Mishin, Alexander S. ; Yampolsky, Ilia V. ; Sarkisyan, Karen S.
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2023-01, Vol.24 (2), p.1317
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Newsletter articlesFull Text
INTERNATIONAL PATENT: BEREZKIN, YAROSLAV VYACHESLAVOVICH , SARKISYAN, KAREN GARNIKOVICH , SLASTININ, VLADIMIR VIKTOROVICH , YARYGIN, NIKOLAY VLADIMIROVICH FILES APPLICATION FOR "CORTICAL ANCHOR FOR FL...
Publisher:Washington, D.C: HT Digital Streams Limited
Journal title:US Fed News Service, Including US State News, 2021
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Author Correction: Plants with genetically encoded autoluminescence
Author / Creator:Mitiouchkina, Tatiana ; Mishin, Alexander S. ; Somermeyer, Louisa Gonzalez ; Markina, Nadezhda M. ; Chepurnyh, Tatiana V. ; Guglya, Elena B. ; Karataeva, Tatiana A. ; Palkina, Kseniia A. ; Shakhova, Ekaterina S. ; Fakhranurova, Liliia I. ; Chekova, Sofia V. ; Tsarkova, Aleksandra S. ; Golubev, Yaroslav V. ; Negrebetsky, Vadim V. ; Dolgushin, Sergey A. ; Shalaev, Pavel V. ; Shlykov, Dmitry ; Melnik, Olesya A. ; Shipunova, Victoria O. ; Deyev, Sergey M. ; Bubyrev, Andrey I. ; Pushin, Alexander S. ; Choob, Vladimir V. ; Dolgov, Sergey V. ; Kondrashov, Fyodor A. ; Yampolsky, Ilia V. ; Sarkisyan, Karen S.
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2020-08, Vol.38 (8), p.1001-1001
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ArticlesPeer ReviewedFull Text
Tryptophan-based chromophore in fluorescent proteins can be anionic
Author / Creator:Sarkisyan, Karen S. ; Yampolsky, Ilia V. ; Solntsev, Kyril M. ; Lukyanov, Sergey A. ; Lukyanov, Konstantin A. ; Mishin, Alexander S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2012-08, Vol.2 (1), p.608, Article 608
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ArticlesPeer ReviewedFull Text
Plants with genetically encoded autoluminescence
Author / Creator:Mitiouchkina, Tatiana ; Mishin, Alexander S. ; Somermeyer, Louisa Gonzalez ; Markina, Nadezhda M. ; Chepurnyh, Tatiana V. ; Guglya, Elena B. ; Karataeva, Tatiana A. ; Palkina, Kseniia A. ; Shakhova, Ekaterina S. ; Fakhranurova, Liliia I. ; Chekova, Sofia V. ; Tsarkova, Aleksandra S. ; Golubev, Yaroslav V. ; Negrebetsky, Vadim V. ; Dolgushin, Sergey A. ; Shalaev, Pavel V. ; Shlykov, Dmitry ; Melnik, Olesya A. ; Shipunova, Victoria O. ; Deyev, Sergey M. ; Bubyrev, Andrey I. ; Pushin, Alexander S. ; Choob, Vladimir V. ; Dolgov, Sergey V. ; Kondrashov, Fyodor A. ; Yampolsky, Ilia V. ; Sarkisyan, Karen S.
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2020-08, Vol.38 (8), p.944-946
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An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape

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KillerOrange, a Genetically Encoded Photosensitizer Activated by Blue and Green Light

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Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics

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Heterogeneity of the GFP fitness landscape and data-driven protein design

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Triple Reporter Assay: A Non-Overlapping Luciferase Assay for the Measurement of Complex Macromolecular Regulation in Cancer Cells Using a New Mushroom Luciferase–Luciferin Pair

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Bioluminescence-Driven Optogenetics

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Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems

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Fluorescent Protein Based FRET Pairs with Improved Dynamic Range for Fluorescence Lifetime Measurements

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A brief review of bioluminescent systems (2019)

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Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore

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Local fitness landscape of the green fluorescent protein

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Measuring Caenorhabditis elegans Spatial Foraging and Food Intake Using Bioluminescent Bacteria

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Genetically Encoded Red Photosensitizers with Enhanced Phototoxicity

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FUCCI-Red: a single-color cell cycle indicator for fluorescence lifetime imaging

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An improved pathway for autonomous bioluminescence imaging in eukaryotes

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Domain Truncation in Hispidin Synthase Orthologs from Non-Bioluminescent Fungi Does Not Lead to Hispidin Biosynthesis

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INTERNATIONAL PATENT: BEREZKIN, YAROSLAV VYACHESLAVOVICH , SARKISYAN, KAREN GARNIKOVICH , SLASTININ, VLADIMIR VIKTOROVICH , YARYGIN, NIKOLAY VLADIMIROVICH FILES APPLICATION FOR "CORTICAL ANCHOR FOR FL...

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Author Correction: Plants with genetically encoded autoluminescence

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Tryptophan-based chromophore in fluorescent proteins can be anionic

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Plants with genetically encoded autoluminescence

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