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ArticlesPeer ReviewedFull Text
Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7
Author / Creator:Nakamura, Akihiro ; Suzuki, Yoshiyuki ; Sakamoto, Yasumitsu ; Roppongi, Saori ; Kushibiki, Chisato ; Yonezawa, Natsuri ; Takahashi, Masato ; Shida, Yosuke ; Gouda, Hiroaki ; Nonaka, Takamasa ; Tanaka, Nobutada ; Ogasawara, Wataru
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-04, Vol.11 (1), p.7929-16, Article 7929
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ArticlesPeer ReviewedFull Text
The Diverse Binding Modes Explain the Nanomolar Levels of Inhibitory Activities Against 1-Deoxy-d-Xylulose 5-Phosphate Reductoisomerase from Plasmodium falciparum Exhibited by Reverse Hydroxamate Anal...
Author / Creator:Takada, Sana ; Abdullaziz, Mona A. ; Höfmann, Stefan ; Knak, Talea ; Ozawa, Shin-ichiro ; Sakamoto, Yasumitsu ; Kurz, Thomas ; Tanaka, Nobutada
Publisher:Switzerland: MDPI AG
Journal title:Molecules (Basel, Switzerland), 2025-01, Vol.30 (1), p.72
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ArticlesPeer ReviewedFull Text
Over 40 Years of Fosmidomycin Drug Research: A Comprehensive Review and Future Opportunities
Author / Creator:Knak, Talea ; Abdullaziz, Mona A. ; Höfmann, Stefan ; Alves Avelar, Leandro A. ; Klein, Saskia ; Martin, Matthew ; Fischer, Markus ; Tanaka, Nobutada ; Kurz, Thomas
Publisher:Switzerland: MDPI AG
Journal title:Pharmaceuticals (Basel, Switzerland), 2022-12, Vol.15 (12), p.1553
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ArticlesPeer ReviewedFull Text
Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum
Author / Creator:Umeda, Tomonobu ; Tanaka, Nobutada ; Kusakabe, Yoshio ; Nakanishi, Masayuki ; Kitade, Yukio ; Nakamura, Kazuo T.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2011-06, Vol.1 (1), p.9-9, Article 9
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ArticlesPeer ReviewedFull Text
Fragment-based discovery of the first nonpeptidyl inhibitor of an S46 family peptidase
Author / Creator:Sakamoto, Yasumitsu ; Suzuki, Yoshiyuki ; Nakamura, Akihiro ; Watanabe, Yurie ; Sekiya, Mizuki ; Roppongi, Saori ; Kushibiki, Chisato ; Iizuka, Ippei ; Tani, Osamu ; Sakashita, Hitoshi ; Inaka, Koji ; Tanaka, Hiroaki ; Yamada, Mitsugu ; Ohta, Kazunori ; Honma, Nobuyuki ; Shida, Yosuke ; Ogasawara, Wataru ; Nakanishi-Matsui, Mayumi ; Nonaka, Takamasa ; Gouda, Hiroaki ; Tanaka, Nobutada
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-09, Vol.9 (1), p.13587-15, Article 13587
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ArticlesPeer ReviewedFull Text
Identification of the Catalytic Triad of Family S46 Exopeptidases, Closely Related to Clan PA Endopeptidases
Author / Creator:Suzuki, Yoshiyuki ; Sakamoto, Yasumitsu ; Tanaka, Nobutada ; Okada, Hirofumi ; Morikawa, Yasushi ; Ogasawara, Wataru
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2014-03, Vol.4 (1), p.4292, Article 4292
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ArticlesPeer ReviewedFull Text
Structural basis for recognition of 2′,5′-linked oligoadenylates by human ribonuclease L
Author / Creator:Tanaka, Nobutada ; Nakanishi, Masayuki ; Kusakabe, Yoshio ; Goto, Yoshikuni ; Kitade, Yukio ; Nakamura, Kazuo T
Publisher:Chichester, UK: John Wiley & Sons, Ltd
Journal title:The EMBO journal, 2004-10, Vol.23 (20), p.3929-3938
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ArticlesFull Text
The impact of a single-nucleotide mutation of bgl2 on cellulase induction in a Trichoderma reesei mutant
Author / Creator:Shida, Yosuke ; Yamaguchi, Kaori ; Nitta, Mikiko ; Nakamura, Ayana ; Takahashi, Machiko ; Kidokoro, Shun-ichi ; Mori, Kazuki ; Tashiro, Kosuke ; Kuhara, Satoru ; Matsuzawa, Tomohiko ; Yaoi, Katsuro ; Sakamoto, Yasumitsu ; Tanaka, Nobutada ; Morikawa, Yasushi ; Ogasawara, Wataru
Publisher:England: BioMed Central Ltd
Journal title:Biotechnology for biofuels, 2015-12, Vol.8 (1), p.230-230, Article 230
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ArticlesPeer ReviewedFull Text
Structural insights into the reaction mechanism of S-adenosyl-L-homocysteine hydrolase
Author / Creator:Kusakabe, Yoshio ; Ishihara, Masaaki ; Umeda, Tomonobu ; Kuroda, Daisuke ; Nakanishi, Masayuki ; Kitade, Yukio ; Gouda, Hiroaki ; Nakamura, Kazuo T. ; Tanaka, Nobutada
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2015-11, Vol.5 (1), p.16641-16641, Article 16641
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ArticlesPeer ReviewedFull Text
Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues
Author / Creator:Roppongi, Saori ; Suzuki, Yoshiyuki ; Tateoka, Chika ; Fujimoto, Mayu ; Morisawa, Saori ; Iizuka, Ippei ; Nakamura, Akihiro ; Honma, Nobuyuki ; Shida, Yosuke ; Ogasawara, Wataru ; Tanaka, Nobutada ; Sakamoto, Yasumitsu ; Nonaka, Takamasa
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2018-02, Vol.8 (1), p.2714-18, Article 2714
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ArticlesPeer ReviewedFull Text
S46 Peptidases are the First Exopeptidases to be Members of Clan PA
Author / Creator:Sakamoto, Yasumitsu ; Suzuki, Yoshiyuki ; Iizuka, Ippei ; Tateoka, Chika ; Roppongi, Saori ; Fujimoto, Mayu ; Inaka, Koji ; Tanaka, Hiroaki ; Masaki, Mika ; Ohta, Kazunori ; Okada, Hirofumi ; Nonaka, Takamasa ; Morikawa, Yasushi ; Nakamura, Kazuo T. ; Ogasawara, Wataru ; Tanaka, Nobutada
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2014-05, Vol.4 (1), p.4977-4977, Article 4977
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ArticlesPeer ReviewedFull Text
Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity
Author / Creator:Sakamoto, Yasumitsu ; Suzuki, Yoshiyuki ; Iizuka, Ippei ; Tateoka, Chika ; Roppongi, Saori ; Fujimoto, Mayu ; Inaka, Koji ; Tanaka, Hiroaki ; Yamada, Mitsugu ; Ohta, Kazunori ; Gouda, Hiroaki ; Nonaka, Takamasa ; Ogasawara, Wataru ; Tanaka, Nobutada
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2015-06, Vol.5 (1), p.11151-11151, Article 11151
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ArticlesFull Text
The stability of NPM1 oligomers regulated by acidic disordered regions controls the quality of liquid droplets
Author / Creator:Okuwaki, Mitsuru ; Ozawa, Shin-Ichiro ; Ebine, Shuhei ; Motoki Juichi ; Umeki, Tadanobu ; Niioka, Kazuki ; Kikuchi, Taiyo ; Tanaka, Nobutada
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2023-01
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Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7

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The Diverse Binding Modes Explain the Nanomolar Levels of Inhibitory Activities Against 1-Deoxy-d-Xylulose 5-Phosphate Reductoisomerase from Plasmodium falciparum Exhibited by Reverse Hydroxamate Anal...

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Over 40 Years of Fosmidomycin Drug Research: A Comprehensive Review and Future Opportunities

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Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum

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Fragment-based discovery of the first nonpeptidyl inhibitor of an S46 family peptidase

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Identification of the Catalytic Triad of Family S46 Exopeptidases, Closely Related to Clan PA Endopeptidases

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Structural basis for recognition of 2′,5′-linked oligoadenylates by human ribonuclease L

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The impact of a single-nucleotide mutation of bgl2 on cellulase induction in a Trichoderma reesei mutant

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Structural insights into the reaction mechanism of S-adenosyl-L-homocysteine hydrolase

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Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues

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S46 Peptidases are the First Exopeptidases to be Members of Clan PA

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Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity

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The stability of NPM1 oligomers regulated by acidic disordered regions controls the quality of liquid droplets

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