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ArticlesPeer ReviewedFull Text
ILC2s amplify PD-1 blockade by activating tissue-specific cancer immunity
Author / Creator:Moral, John Alec ; Leung, Joanne ; Rojas, Luis A. ; Ruan, Jennifer ; Zhao, Julia ; Sethna, Zachary ; Ramnarain, Anita ; Gasmi, Billel ; Gururajan, Murali ; Redmond, David ; Askan, Gokce ; Bhanot, Umesh ; Elyada, Ela ; Park, Youngkyu ; Tuveson, David A. ; Gönen, Mithat ; Leach, Steven D. ; Wolchok, Jedd D. ; DeMatteo, Ronald P. ; Merghoub, Taha ; Balachandran, Vinod P.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2020-03, Vol.579 (7797), p.130-135
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Transcriptomic characterization of fibrolamellar hepatocellular carcinoma
Author / Creator:Simon, Elana P. ; Freije, Catherine A. ; Farber, Benjamin A. ; Lalazar, Gadi ; Darcy, David G. ; Honeyman, Joshua N. ; Chiaroni-Clarke, Rachel ; Dill, Brian D. ; Molina, Henrik ; Bhanot, Umesh K. ; La Quaglia, Michael P. ; Rosenberg, Brad R. ; Simon, Sanford M.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2015-11, Vol.112 (44), p.E5916-E5925
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Pancreatic intraductal tubulopapillary neoplasm is genetically distinct from intraductal papillary mucinous neoplasm and ductal adenocarcinoma
Author / Creator:Basturk, Olca ; Berger, Michael F ; Yamaguchi, Hiroshi ; Adsay, Volkan ; Askan, Gokce ; Bhanot, Umesh K ; Zehir, Ahmet ; Carneiro, Fatima ; Hong, Seung-Mo ; Zamboni, Giuseppe ; Dikoglu, Esra ; Jobanputra, Vaidehi ; Wrzeszczynski, Kazimierz O ; Balci, Serdar ; Allen, Peter ; Ikari, Naoki ; Takeuchi, Shoko ; Akagawa, Hiroyuki ; Kanno, Atsushi ; Shimosegawa, Tooru ; Morikawa, Takanori ; Motoi, Fuyuhiko ; Unno, Michiaki ; Higuchi, Ryota ; Yamamoto, Masakazu ; Shimizu, Kyoko ; Furukawa, Toru ; Klimstra, David S
Publisher:New York: Nature Publishing Group US
Journal title:Modern pathology, 2017-12, Vol.30 (12), p.1760-1772
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The oncocytic subtype is genetically distinct from other pancreatic intraductal papillary mucinous neoplasm subtypes
Author / Creator:Basturk, Olca ; Tan, Marcus ; Bhanot, Umesh ; Allen, Peter ; Adsay, Volkan ; Scott, Sasinya N ; Shah, Ronak ; Berger, Michael F ; Askan, Gokce ; Dikoglu, Esra ; Jobanputra, Vaidehi ; Wrzeszczynski, Kazimierz O ; Sigel, Carlie ; Iacobuzio-Donahue, Christine ; Klimstra, David S
Publisher:New York: Elsevier Inc
Journal title:Modern pathology, 2016-09, Vol.29 (9), p.1058-1069
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Mechanisms of parenchymal injury and signaling pathways in ectatic ducts of chronic pancreatitis: implications for pancreatic carcinogenesis
Author / Creator:Bhanot, Umesh K ; Möller, Peter
Publisher:New York: Elsevier Inc
Journal title:Laboratory investigation, 2009-05, Vol.89 (5), p.489-497
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Mutational Signatures of De-Differentiation in Functional Non-Coding Regions of Melanoma Genomes
Author / Creator:Parker, Stephen C. J. ; Gartner, Jared ; Cardenas-Navia, Isabel ; Wei, Xiaomu ; Ozel Abaan, Hatice ; Ajay, Subramanian S. ; Hansen, Nancy F. ; Song, Lingyun ; Bhanot, Umesh K. ; Killian, J. Keith ; Gindin, Yevgeniy ; Walker, Robert L. ; Meltzer, Paul S. ; Mullikin, James C. ; Furey, Terrence S. ; Crawford, Gregory E. ; Rosenberg, Steven A. ; Samuels, Yardena ; Margulies, Elliott H.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2012-08, Vol.8 (8), p.e1002871-e1002871
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Detection of a Recurrent DNAJB1-PRKACA Chimeric Transcript in Fibrolamellar Hepatocellular Carcinoma
Author / Creator:Honeyman, Joshua N. ; Simon, Elana P. ; Robine, Nicolas ; Chiaroni-Clarke, Rachel ; Darcy, David G. ; Lim, Irene Isabel P. ; Gleason, Caroline E. ; Murphy, Jennifer M. ; Rosenberg, Brad R. ; Teegan, Lydia ; Takacs, Constantin N. ; Botero, Sergio ; Belote, Rachel ; Germer, Soren ; Emde, Anne-Katrin ; Vacic, Vladimir ; Bhanot, Umesh ; LaQuaglia, Michael P. ; Simon, Sanford M.
Publisher:United States: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2014-02, Vol.343 (6174), p.1010-1014
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Comprehensive molecular characterization of lung tumors implicates AKT and MYC signaling in adenocarcinoma to squamous cell transdifferentiation
Author / Creator:Quintanal-Villalonga, Alvaro ; Taniguchi, Hirokazu ; Zhan, Yingqian A. ; Hasan, Maysun M. ; Chavan, Shweta S. ; Meng, Fanli ; Uddin, Fathema ; Allaj, Viola ; Manoj, Parvathy ; Shah, Nisargbhai S. ; Chan, Joseph M. ; Ciampricotti, Metamia ; Chow, Andrew ; Offin, Michael ; Ray-Kirton, Jordana ; Egger, Jacklynn D. ; Bhanot, Umesh K. ; Linkov, Irina ; Asher, Marina ; Roehrl, Michael H. ; Ventura, Katia ; Qiu, Juan ; de Stanchina, Elisa ; Chang, Jason C. ; Rekhtman, Natasha ; Houck-Loomis, Brian ; Koche, Richard P. ; Yu, Helena A. ; Sen, Triparna ; Rudin, Charles M.
Publisher:England: BioMed Central Ltd
Journal title:Journal of hematology and oncology, 2021-10, Vol.14 (1), p.170-170, Article 170
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Biobanking of Human Pancreas Cancer Tissue: Impact of Ex-Vivo Procurement Times on RNA Quality
Author / Creator:Rudloff, Udo ; Bhanot, Umesh ; Gerald, William ; Klimstra, David S. ; Jarnagin, William R. ; Brennan, Murray F. ; Allen, Peter J.
Publisher:New York: Springer-Verlag
Journal title:Annals of surgical oncology, 2010-08, Vol.17 (8), p.2229-2236
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Clinical and molecular features of acquired resistance to immunotherapy in non-small cell lung cancer
Author / Creator:Memon, Danish ; Rizvi, Hira ; Fromm, George ; Lihm, Jayon ; Schoenfeld, Adam J ; Sauter, Jennifer L ; Luo, Jia ; Chow, Andrew ; Bhanot, Umesh K ; Mccarthy, Caroline ; Ye, Darwin ; Vanderbilt, Chad M ; Liu, Cailian ; Abu-Akeel, Mohsen ; Plodkowski, Andrew J ; Mcgranahan, Nicholas ; Luksza, Marta ; Greenbaum, Benjamin D ; Taha Merghoub ; Minn, Andy J ; Beltrao, Pedro ; Schreiber, Taylor H ; Miller, Martin L ; Hellmann, Matthew D
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-07
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Multi-omic analysis of lung tumors defines pathways activated in neuroendocrine transformation
Author / Creator:Quintanal-Villalonga, Alvaro ; Taniguchi, Hirozaku ; Zhan, Yingqian A ; Hasan, Maysun M ; Meng, Fanli ; Uddin, Fathema ; Donoghue, Mark ; Won, Helen H ; Chavan, Shweta S ; Chan, Joseph M ; Ciampricotti, Metamia ; Chow, Andrew ; Offin, Michael ; Chang, Jason C ; Ray-Kirton, Jordana ; Egger, Jacklynn ; Bhanot, Umesh K ; Silber, Joachim ; Iacobuzio-Donahue, Christine A ; Roehrl, Michael H ; Hollmann, Travis J ; Yu, Helena A ; Rekhtman, Natasha ; Poirier, John T ; Houck-Loomis, Brian ; Koche, Richard P ; Rudin, Charles M ; Sen, Triparna
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-12
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CDC7 inhibition impairs neuroendocrine transformation in lung and prostate tumors through MYC degradation
Author / Creator:Quintanal-Villalonga, Alvaro ; Kawasaki, Kenta ; Redin, Esther ; Uddin, Fathema ; Rakhade, Swanand ; Durani, Vidushi ; Sabet, Amin ; Shafer, Moniquetta ; Karthaus, Wouter R. ; Zaidi, Samir ; Zhan, Yingqian A. ; Manoj, Parvathy ; Sridhar, Harsha ; Kinyua, Dennis ; Zhong, Hong ; Mello, Barbara P. ; Ciampricotti, Metamia ; Bhanot, Umesh K. ; Linkov, Irina ; Qiu, Juan ; Patel, Radhika A. ; Morrissey, Colm ; Mehta, Sanjoy ; Barnes, Jesse ; Haffner, Michael C. ; Socci, Nicholas D. ; Koche, Richard P. ; de Stanchina, Elisa ; Molina-Pinelo, Sonia ; Salehi, Sohrab ; Yu, Helena A. ; Chan, Joseph M. ; Rudin, Charles M.
Publisher:London: Nature Publishing Group UK
Journal title:Signal transduction and targeted therapy, 2024-07, Vol.9 (1), p.189-14, Article 189
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Identification of unique neoantigen qualities in long term pancreatic cancer survivors
Author / Creator:Balachandran, Vinod P. ; Łuksza, Marta ; Zhao, Julia N. ; Makarov, Vladimir ; Moral, John Alec ; Remark, Romain ; Herbst, Brian ; Askan, Gokce ; Bhanot, Umesh ; Senbabaoglu, Yasin ; Wells, Daniel K. ; Cary, Charles Ian Ormsby ; Grbovic-Huezo, Olivera ; Attiyeh, Marc ; Medina, Benjamin ; Zhang, Jennifer ; Loo, Jennifer ; Saglimbeni, Joseph ; Abu-Akeel, Mohsen ; Zappasodi, Roberta ; Riaz, Nadeem ; Smoragiewicz, Martin ; Kelley, Z. Larkin ; Basturk, Olca ; Gönen, Mithat ; Levine, Arnold J. ; Allen, Peter J. ; Fearon, Douglas T. ; Merad, Miriam ; Gnjatic, Sacha ; Iacobuzio-Donahue, Christine A. ; Wolchok, Jedd D. ; DeMatteo, Ronald P. ; Chan, Timothy A. ; Greenbaum, Benjamin D. ; Merghoub, Taha ; Leach, Steven D.
Journal title:Nature (London), 2017-11, Vol.551 (7681), p.512-516
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Parenchymal regression in chronic pancreatitis spares islets reprogrammed for the expression of NFκB and IAPs
Author / Creator:Hasel, Cornelia ; Bhanot, Umesh K ; Heydrich, René ; Sträter, Jörn ; Möller, Peter
Publisher:New York: Elsevier Inc
Journal title:Laboratory investigation, 2005-10, Vol.85 (10), p.1263-1275
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Parenchymal regression in chronic pancreatitis spares islets reprogrammed for the expression of NFkappaB and IAPs
Author / Creator:Hasel, Cornelia ; Bhanot, Umesh K ; Heydrich, René ; Sträter, Jörn ; Möller, Peter
Publisher:United States
Journal title:Laboratory investigation, 2005-10, Vol.85 (10), p.1263-1275
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Parenchymal regression in chronic pancreatitis spares islets reprogrammed for the expression of NF[kappa]B and IAPs
Author / Creator:Hasel, Cornelia ; Bhanot, Umesh K ; Heydrich, René ; Sträter, Jörn ; Möller, Peter
Publisher:New York: Nature Publishing Group
Journal title:Laboratory investigation, 2005-10, Vol.85 (10), p.1263
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Subclonal somatic copy number alterations emerge and dominate in recurrent osteosarcoma
Author / Creator:Kinnaman, Michael D ; Zaccaria, Simone ; Makohon-Moore, Alvin ; Arnold, Brian ; Levine, Max ; Gunes Gundem ; Arango Ossa, Juan E ; Glodzik, Dominik ; Rodriguez Sanchez, M Irene ; Bouvier, Nancy ; Li, Shanita ; Stockfisch, Emily ; Dunigan, Marisa ; Cobbs, Cassidy ; Bhanot, Umesh ; You, Daoqi ; Mullen, Katelyn ; Melchor, Jerry ; Ortiz, Michael V ; O'donohue, Tara ; Slotkin, Emily ; Wexler, Leonard H ; Dela Cruz, Filemon S ; Hameed, Meera ; Glade Bender, Julia L ; Tap, William D ; Meyers, Paul ; Papaemmanuil, Elli ; Kung, Andrew L ; Iacobuzio-Donahue, Christine A
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2023-01
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Single cell profiling reveals novel tumor and myeloid subpopulations in small cell lung cancer
Author / Creator:Chan, Joseph M ; Quintanal-Villalonga, Álvaro ; Gao, Vianne ; Xie, Yubin ; Allaj, Viola ; Chaudhary, Ojasvi ; Masilionis, Ignas ; Egger, Jacklynn ; Chow, Andrew ; Walle, Thomas ; Mattar, Marissa ; Dig Vk Yarlagadda ; Wang, James L ; Uddin, Fathema ; Offin, Michael ; Ciampricotti, Metamia ; Bhanot, Umesh K ; Lai, W Victoria ; Bott, Matthew J ; Jones, David R ; Ruiz, Arvin ; Hollmann, Travis ; Poirier, John T ; Nawy, Tal ; Mazutis, Linas ; Sen, Triparna ; Dana Pe’er ; Rudin, Charles M
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-12
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ILC2s amplify PD-1 blockade by activating tissue-specific cancer immunity

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Transcriptomic characterization of fibrolamellar hepatocellular carcinoma

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Pancreatic intraductal tubulopapillary neoplasm is genetically distinct from intraductal papillary mucinous neoplasm and ductal adenocarcinoma

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The oncocytic subtype is genetically distinct from other pancreatic intraductal papillary mucinous neoplasm subtypes

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Mechanisms of parenchymal injury and signaling pathways in ectatic ducts of chronic pancreatitis: implications for pancreatic carcinogenesis

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Mutational Signatures of De-Differentiation in Functional Non-Coding Regions of Melanoma Genomes

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Detection of a Recurrent DNAJB1-PRKACA Chimeric Transcript in Fibrolamellar Hepatocellular Carcinoma

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Comprehensive molecular characterization of lung tumors implicates AKT and MYC signaling in adenocarcinoma to squamous cell transdifferentiation

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Biobanking of Human Pancreas Cancer Tissue: Impact of Ex-Vivo Procurement Times on RNA Quality

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Clinical and molecular features of acquired resistance to immunotherapy in non-small cell lung cancer

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Multi-omic analysis of lung tumors defines pathways activated in neuroendocrine transformation

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CDC7 inhibition impairs neuroendocrine transformation in lung and prostate tumors through MYC degradation

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Identification of unique neoantigen qualities in long term pancreatic cancer survivors

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Parenchymal regression in chronic pancreatitis spares islets reprogrammed for the expression of NFκB and IAPs

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Parenchymal regression in chronic pancreatitis spares islets reprogrammed for the expression of NFkappaB and IAPs

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Parenchymal regression in chronic pancreatitis spares islets reprogrammed for the expression of NF[kappa]B and IAPs

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Subclonal somatic copy number alterations emerge and dominate in recurrent osteosarcoma

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Single cell profiling reveals novel tumor and myeloid subpopulations in small cell lung cancer

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