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ArticlesPeer ReviewedFull Text
Single-cell transcriptomic characterization of a gastrulating human embryo
Author / Creator:Tyser, Richard C. V. ; Mahammadov, Elmir ; Nakanoh, Shota ; Vallier, Ludovic ; Scialdone, Antonio ; Srinivas, Shankar
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2021-12, Vol.600 (7888), p.285-289
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Using single‐cell genomics to understand developmental processes and cell fate decisions
Author / Creator:Griffiths, Jonathan A ; Scialdone, Antonio ; Marioni, John C
Publisher:London: Nature Publishing Group UK
Journal title:Molecular systems biology, 2018-04, Vol.14 (4), p.e8046-n/a
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Epstein–Barr virus reprograms human B lymphocytes immediately in the prelatent phase of infection
Author / Creator:Mrozek-Gorska, Paulina ; Buschle, Alexander ; Pich, Dagmar ; Schwarzmayr, Thomas ; Fechtner, Ron ; Scialdone, Antonio ; Hammerschmidt, Wolfgang
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2019-08, Vol.116 (32), p.16046-16055
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Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
Author / Creator:Buettner, Florian ; Natarajan, Kedar N ; Casale, F Paolo ; Proserpio, Valentina ; Scialdone, Antonio ; Theis, Fabian J ; Teichmann, Sarah A ; Marioni, John C ; Stegle, Oliver
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2015-02, Vol.33 (2), p.155-160
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Pluripotent state transitions coordinate morphogenesis in mouse and human embryos
Author / Creator:Shahbazi, Marta N. ; Scialdone, Antonio ; Skorupska, Natalia ; Weberling, Antonia ; Recher, Gaelle ; Zhu, Meng ; Jedrusik, Agnieszka ; Devito, Liani G. ; Noli, Laila ; Macaulay, Iain C. ; Buecker, Christa ; Khalaf, Yakoub ; Ilic, Dusko ; Voet, Thierry ; Marioni, John C. ; Zernicka-Goetz, Magdalena
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2017-12, Vol.552 (7684), p.239-243
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The role of cell geometry and cell-cell communication in gradient sensing
Author / Creator:Fiorentino, Jonathan ; Scialdone, Antonio
Publisher:United States: Public Library of Science
Journal title:PLoS computational biology, 2022-03, Vol.18 (3), p.e1009552
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Hierarchical deconstruction of mouse olfactory sensory neurons: from whole mucosa to single-cell RNA-seq
Author / Creator:Saraiva, Luis R. ; Ibarra-Soria, Ximena ; Khan, Mona ; Omura, Masayo ; Scialdone, Antonio ; Mombaerts, Peter ; Marioni, John C. ; Logan, Darren W.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2015-12, Vol.5 (1), p.18178-18178, Article 18178
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Retinoic acid signaling is critical during the totipotency window in early mammalian development
Author / Creator:Iturbide, Ane ; Ruiz Tejada Segura, Mayra L. ; Noll, Camille ; Schorpp, Kenji ; Rothenaigner, Ina ; Ruiz-Morales, Elias R. ; Lubatti, Gabriele ; Agami, Ahmed ; Hadian, Kamyar ; Scialdone, Antonio ; Torres-Padilla, Maria-Elena
Publisher:New York: Nature Publishing Group US
Journal title:Nature structural & molecular biology, 2021-06, Vol.28 (6), p.521-532
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Leveraging prior knowledge to infer gene regulatory networks from single-cell RNA-sequencing data
Author / Creator:Stock, Marco ; Losert, Corinna ; Zambon, Matteo ; Popp, Niclas ; Lubatti, Gabriele ; Hörmanseder, Eva ; Heinig, Matthias ; Scialdone, Antonio
Publisher:London: Nature Publishing Group UK
Journal title:Molecular systems biology, 2025-02, Vol.21 (3), p.214-230
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DNA replication fork speed underlies cell fate changes and promotes reprogramming
Author / Creator:Nakatani, Tsunetoshi ; Lin, Jiangwei ; Ji, Fei ; Ettinger, Andreas ; Pontabry, Julien ; Tokoro, Mikiko ; Altamirano-Pacheco, Luis ; Fiorentino, Jonathan ; Mahammadov, Elmir ; Hatano, Yu ; Van Rechem, Capucine ; Chakraborty, Damayanti ; Ruiz-Morales, Elias R. ; Arguello Pascualli, Paola Y. ; Scialdone, Antonio ; Yamagata, Kazuo ; Whetstine, Johnathan R. ; Sadreyev, Ruslan I. ; Torres-Padilla, Maria-Elena
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2022-03, Vol.54 (3), p.318-327
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The role of Müller cells in tractional macular disorders: an optical coherence tomography study and physical model of mechanical force transmission
Author / Creator:Govetto, Andrea ; Hubschman, Jean-Pierre ; Sarraf, David ; Figueroa, Marta S ; Bottoni, Ferdinando ; dell'Omo, Roberto ; Curcio, Christine A ; Seidenari, Patrizio ; Delledonne, Giulia ; Gunzenhauser, Robert ; Ferrara, Mariantonia ; Au, Adrian ; Virgili, Gianni ; Scialdone, Antonio ; Repetto, Rodolfo ; Romano, Mario R
Publisher:England: BMJ Publishing Group LTD
Journal title:British journal of ophthalmology, 2020-04, Vol.104 (4), p.466-472
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Mosaic autosomal aneuploidies are detectable from single-cell RNAseq data
Author / Creator:Griffiths, Jonathan A. ; Scialdone, Antonio ; Marioni, John C.
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2017-11, Vol.18 (1), p.904-904, Article 904
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Arabidopsis plants perform arithmetic division to prevent starvation at night
Author / Creator:Scialdone, Antonio ; Mugford, Sam T ; Feike, Doreen ; Skeffington, Alastair ; Borrill, Philippa ; Graf, Alexander ; Smith, Alison M ; Howard, Martin
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2013-06, Vol.2, p.e00669-e00669
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Choroidal macrovessel: Optical coherence tomography angiography and imaging features
Author / Creator:Casalino, Giuseppe ; De Simone, Luca ; Scialdone, Antonio ; Pavesio, Carlos
Publisher:India: Wolters Kluwer India Pvt. Ltd
Journal title:Indian journal of ophthalmology, 2019-07, Vol.67 (7), p.1168-1170
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Conformation Regulation of the X Chromosome Inactivation Center: A Model
Author / Creator:Scialdone, Antonio ; Cataudella, Ilaria ; Barbieri, Mariano ; Prisco, Antonella ; Nicodemi, Mario
Publisher:United States: Public Library of Science
Journal title:PLoS computational biology, 2011-10, Vol.7 (10), p.e1002229-e1002229
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Mechanics and Dynamics of X-Chromosome Pairing at X Inactivation
Author / Creator:Scialdone, Antonio ; Nicodemi, Mario
Publisher:United States: Public Library of Science
Journal title:PLoS computational biology, 2008-12, Vol.4 (12), p.e1000244-e1000244
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DNA Loci Cross-Talk through Thermodynamics
Author / Creator:Scialdone, Antonio ; Nicodemi, Mario
Publisher:Cairo, Egypt: Hindawi Puplishing Corporation
Journal title:BioMed research international, 2009-01, Vol.2009 (2009), p.1-8
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Normalizing single-cell RNA sequencing data: challenges and opportunities
Author / Creator:Vallejos, Catalina A ; Risso, Davide ; Scialdone, Antonio ; Dudoit, Sandrine ; Marioni, John C
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2017-06, Vol.14 (6), p.565-571
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Resolving early mesoderm diversification through single-cell expression profiling
Author / Creator:Scialdone, Antonio ; Tanaka, Yosuke ; Jawaid, Wajid ; Moignard, Victoria ; Wilson, Nicola K. ; Macaulay, Iain C. ; Marioni, John C. ; Göttgens, Berthold
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2016-07, Vol.535 (7611), p.289-293
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Intravitreal bevacizumab for CNV-complicated tilted disk syndrome
Author / Creator:Milani, Paolo ; Pece, Alfredo ; Moretti, Giuseppe ; Lino, Pruneri ; Scialdone, Antonio
Journal title:Graefe's archive for clinical and experimental ophthalmology, 2009-09, Vol.247 (9), p.1179-1182
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Showing 1 to 20 of 67 results

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Single-cell transcriptomic characterization of a gastrulating human embryo

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Using single‐cell genomics to understand developmental processes and cell fate decisions

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Epstein–Barr virus reprograms human B lymphocytes immediately in the prelatent phase of infection

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Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells

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Pluripotent state transitions coordinate morphogenesis in mouse and human embryos

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The role of cell geometry and cell-cell communication in gradient sensing

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Hierarchical deconstruction of mouse olfactory sensory neurons: from whole mucosa to single-cell RNA-seq

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Retinoic acid signaling is critical during the totipotency window in early mammalian development

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Leveraging prior knowledge to infer gene regulatory networks from single-cell RNA-sequencing data

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DNA replication fork speed underlies cell fate changes and promotes reprogramming

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The role of Müller cells in tractional macular disorders: an optical coherence tomography study and physical model of mechanical force transmission

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Mosaic autosomal aneuploidies are detectable from single-cell RNAseq data

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Arabidopsis plants perform arithmetic division to prevent starvation at night

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Choroidal macrovessel: Optical coherence tomography angiography and imaging features

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Conformation Regulation of the X Chromosome Inactivation Center: A Model

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Mechanics and Dynamics of X-Chromosome Pairing at X Inactivation

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DNA Loci Cross-Talk through Thermodynamics

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Normalizing single-cell RNA sequencing data: challenges and opportunities

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Resolving early mesoderm diversification through single-cell expression profiling

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Intravitreal bevacizumab for CNV-complicated tilted disk syndrome

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