19 results for Shaffer,+Justin+P

19 results for Shaffer,+Justin+P

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    Author / Creator:Li, Yue M. ; Shaffer, Justin P. ; Hall, Brenna ; Ko, Hongseok
    Publisher:United States: Public Library of Science
    Journal title:PloS one, 2019-10, Vol.14 (10), p.e0224417-e0224417
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    Author / Creator:Taylor, Bryn C. ; Lejzerowicz, Franck ; Poirel, Marion ; Shaffer, Justin P. ; Jiang, Lingjing ; Aksenov, Alexander ; Litwin, Nicole ; Humphrey, Gregory ; Martino, Cameron ; Miller-Montgomery, Sandrine ; Dorrestein, Pieter C. ; Veiga, Patrick ; Song, Se Jin ; McDonald, Daniel ; Derrien, Muriel ; Knight, Rob
    Publisher:United States: American Society for Microbiology
    Journal title:mSystems, 2020-03, Vol.5 (2)
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    Author / Creator:Marotz, Clarisse ; Belda-Ferre, Pedro ; Ali, Farhana ; Das, Promi ; Huang, Shi ; Cantrell, Kalen ; Jiang, Lingjing ; Martino, Cameron ; Diner, Rachel E. ; Rahman, Gibraan ; McDonald, Daniel ; Armstrong, George ; Kodera, Sho ; Donato, Sonya ; Ecklu-Mensah, Gertrude ; Gottel, Neil ; Salas Garcia, Mariana C. ; Chiang, Leslie Y. ; Salido, Rodolfo A. ; Shaffer, Justin P. ; Bryant, Mac Kenzie ; Sanders, Karenina ; Humphrey, Greg ; Ackermann, Gail ; Haiminen, Niina ; Beck, Kristen L. ; Kim, Ho-Cheol ; Carrieri, Anna Paola ; Parida, Laxmi ; Vázquez-Baeza, Yoshiki ; Torriani, Francesca J. ; Knight, Rob ; Gilbert, Jack ; Sweeney, Daniel A. ; Allard, Sarah M.
    Publisher:London: BioMed Central
    Journal title:Microbiome, 2021-06, Vol.9 (1), p.1-132, Article 132
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    Author / Creator:Zhu, Qiyun ; Huang, Shi ; Gonzalez, Antonio ; McGrath, Imran ; McDonald, Daniel ; Haiminen, Niina ; Armstrong, George ; Vázquez-Baeza, Yoshiki ; Yu, Julian ; Kuczynski, Justin ; Sepich-Poore, Gregory D. ; Swafford, Austin D. ; Das, Promi ; Shaffer, Justin P. ; Lejzerowicz, Franck ; Belda-Ferre, Pedro ; Havulinna, Aki S. ; Méric, Guillaume ; Niiranen, Teemu ; Lahti, Leo ; Salomaa, Veikko ; Kim, Ho-Cheol ; Jain, Mohit ; Inouye, Michael ; Gilbert, Jack A. ; Knight, Rob
    Publisher:United States: American Society for Microbiology
    Journal title:mSystems, 2022-04, Vol.7 (2), p.e0016722
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    Author / Creator:Shaffer, Justin P. ; Carter, Morgan E. ; Spraker, Joseph E. ; Clark, Meara ; Smith, Brian A. ; Hockett, Kevin L. ; Baltrus, David A. ; Arnold, A. Elizabeth
    Publisher:United States: American Society for Microbiology
    Journal title:mSystems, 2022-04, Vol.7 (2), p.e0009122
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    Author / Creator:Vangay, Pajau ; Burgin, Josephine ; Johnston, Anjanette ; Beck, Kristen L. ; Berrios, Daniel C. ; Blumberg, Kai ; Canon, Shane ; Chain, Patrick ; Chandonia, John-Marc ; Christianson, Danielle ; Costes, Sylvain V. ; Damerow, Joan ; Duncan, William D. ; Dundore-Arias, Jose Pablo ; Fagnan, Kjiersten ; Galazka, Jonathan M. ; Gibbons, Sean M. ; Hays, David ; Hervey, Judson ; Hu, Bin ; Hurwitz, Bonnie L. ; Jaiswal, Pankaj ; Joachimiak, Marcin P. ; Kinkel, Linda ; Ladau, Joshua ; Martin, Stanton L. ; McCue, Lee Ann ; Miller, Kayd ; Mouncey, Nigel ; Mungall, Chris ; Pafilis, Evangelos ; Reddy, T. B. K. ; Richardson, Lorna ; Roux, Simon ; Schriml, Lynn M. ; Shaffer, Justin P. ; Sundaramurthi, Jagadish Chandrabose ; Thompson, Luke R. ; Timme, Ruth E. ; Zheng, Jie ; Wood-Charlson, Elisha M. ; Eloe-Fadrosh, Emiley A.
    Publisher:United States: American Society for Microbiology
    Journal title:mSystems, 2021-02, Vol.6 (1)
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    Author / Creator:Minich, Jeremiah J. ; Ali, Farhana ; Marotz, Clarisse ; Belda-Ferre, Pedro ; Chiang, Leslie ; Shaffer, Justin P. ; Carpenter, Carolina S. ; McDonald, Daniel ; Gilbert, Jack ; Allard, Sarah M. ; Allen, Eric E. ; Knight, Rob ; Sweeney, Daniel A. ; Swafford, Austin D.
    Publisher:England: BioMed Central
    Journal title:Microbiome, 2021-01, Vol.9 (1), p.25-13, Article 25
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    Author / Creator:Martino, Cameron ; McDonald, Daniel ; Cantrell, Kalen ; Dilmore, Amanda Hazel ; Vázquez-Baeza, Yoshiki ; Shenhav, Liat ; Shaffer, Justin P. ; Rahman, Gibraan ; Armstrong, George ; Allaband, Celeste ; Song, Se Jin ; Knight, Rob
    Publisher:United States: American Society for Microbiology
    Journal title:mSystems, 2022-06, Vol.7 (3), p.e0005022-e0005022
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    Author / Creator:Zhu, Qiyun ; Huang, Shi ; Gonzalez, Antonio ; McGrath, Imran ; McDonald, Daniel ; Haiminen, Niina ; Armstrong, George ; Vázquez-Baeza, Yoshiki ; Yu, Julian ; Kuczynski, Justin ; Sepich-Poore, Gregory D. ; Swafford, Austin D. ; Das, Promi ; Shaffer, Justin P. ; Lejzerowicz, Franck ; Belda-Ferre, Pedro ; Havulinna, Aki S. ; Méric, Guillaume ; Niiranen, Teemu ; Lahti, Leo ; Salomaa, Veikko ; Kim, Ho-Cheol ; Jain, Mohit ; Inouye, Michael ; Gilbert, Jack A. ; Knight, Rob
    Publisher:United States: American Society for Microbiology
    Journal title:mSystems, 2024-11, Vol.9 (11), p.e0128924
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    Author / Creator:Armstrong, George ; Martino, Cameron ; Morris, Justin ; Khaleghi, Behnam ; Kang, Jaeyoung ; DeReus, Jeff ; Zhu, Qiyun ; Roush, Daniel ; McDonald, Daniel ; Gonazlez, Antonio ; Shaffer, Justin P. ; Carpenter, Carolina ; Estaki, Mehrbod ; Wandro, Stephen ; Eilert, Sean ; Akel, Ameen ; Eno, Justin ; Curewitz, Ken ; Swafford, Austin D. ; Moshiri, Niema ; Rosing, Tajana ; Knight, Rob
    Publisher:United States: American Society for Microbiology
    Journal title:mSystems, 2022-04, Vol.7 (2), p.e0137821-e0137821
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    Author / Creator:Vangay, Pajau ; Burgin, Josephine ; Johnston, Anjanette ; Beck, Kristen L. ; Berrios, Daniel C. ; Blumberg, Kai ; Canon, Shane ; Chain, Patrick ; Chandonia, John-Marc ; Christianson, Danielle ; Costes, Sylvain V. ; Damerow, Joan ; Duncan, William D. ; Dundore-Arias, Jose Pablo ; Fagnan, Kjiersten ; Galazka, Jonathan M. ; Gibbons, Sean M. ; Hays, David ; Hervey, Judson ; Hu, Bin ; Hurwitz, Bonnie L. ; Jaiswal, Pankaj ; Joachimiak, Marcin P. ; Kinkel, Linda ; Ladau, Joshua ; Martin, Stanton L. ; McCue, Lee Ann ; Miller, Kayd ; Mouncey, Nigel ; Mungall, Chris ; Pafilis, Evangelos ; Reddy, T. B. K. ; Richardson, Lorna ; Roux, Simon ; Schriml, Lynn M. ; Shaffer, Justin P. ; Sundaramurthi, Jagadish Chandrabose ; Thompson, Luke R. ; Timme, Ruth E. ; Zheng, Jie ; Wood-Charlson, Elisha M. ; Eloe-Fadrosh, Emiley A.
    Publisher:United States: American Society for Microbiology
    Journal title:mSystems, 2021-05, Vol.6 (3)
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    Author / Creator:Gauglitz, Julia M. ; West, Kiana A. ; Bittremieux, Wout ; Williams, Candace L. ; Weldon, Kelly C. ; Panitchpakdi, Morgan ; Di Ottavio, Francesca ; Aceves, Christine M. ; Brown, Elizabeth ; Sikora, Nicole C. ; Jarmusch, Alan K. ; Martino, Cameron ; Tripathi, Anupriya ; Meehan, Michael J. ; Dorrestein, Kathleen ; Shaffer, Justin P. ; Coras, Roxana ; Vargas, Fernando ; Goldasich, Lindsay DeRight ; Schwartz, Tara ; Bryant, MacKenzie ; Humphrey, Gregory ; Johnson, Abigail J. ; Spengler, Katharina ; Belda-Ferre, Pedro ; Diaz, Edgar ; McDonald, Daniel ; Zhu, Qiyun ; Elijah, Emmanuel O. ; Wang, Mingxun ; Marotz, Clarisse ; Sprecher, Kate E. ; Vargas-Robles, Daniela ; Withrow, Dana ; Ackermann, Gail ; Herrera, Lourdes ; Bradford, Barry J. ; Marques, Lucas Maciel Mauriz ; Amaral, Juliano Geraldo ; Silva, Rodrigo Moreira ; Veras, Flavio Protasio ; Cunha, Thiago Mattar ; Oliveira, Rene Donizeti Ribeiro ; Louzada-Junior, Paulo ; Mills, Robert H. ; Piotrowski, Paulina K. ; Servetas, Stephanie L. ; Da Silva, Sandra M. ; Jones, Christina M. ; Lin, Nancy J. ; Lippa, Katrice A. ; Jackson, Scott A. ; Daouk, Rima Kaddurah ; Galasko, Douglas ; Dulai, Parambir S. ; Kalashnikova, Tatyana I. ; Wittenberg, Curt ; Terkeltaub, Robert ; Doty, Megan M. ; Kim, Jae H. ; Rhee, Kyung E. ; Beauchamp-Walters, Julia ; Wright, Kenneth P. ; Dominguez-Bello, Maria Gloria ; Manary, Mark ; Oliveira, Michelli F. ; Boland, Brigid S. ; Lopes, Norberto Peporine ; Guma, Monica ; Swafford, Austin D. ; Dutton, Rachel J. ; Knight, Rob ; Dorrestein, Pieter C.
    Publisher:New York: Nature Publishing Group US
    Journal title:Nature biotechnology, 2022-12, Vol.40 (12), p.1774-1779
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    Author / Creator:Shaffer, Justin P. ; Nothias, Louis-Félix ; Thompson, Luke R. ; Sanders, Jon G. ; Salido, Rodolfo A. ; Couvillion, Sneha P. ; Brejnrod, Asker D. ; Lejzerowicz, Franck ; Haiminen, Niina ; Huang, Shi ; Lutz, Holly L. ; Zhu, Qiyun ; Martino, Cameron ; Morton, James T. ; Karthikeyan, Smruthi ; Nothias-Esposito, Mélissa ; Dührkop, Kai ; Böcker, Sebastian ; Kim, Hyun Woo ; Aksenov, Alexander A. ; Bittremieux, Wout ; Minich, Jeremiah J. ; Marotz, Clarisse ; Bryant, MacKenzie M. ; Sanders, Karenina ; Schwartz, Tara ; Humphrey, Greg ; Vásquez-Baeza, Yoshiki ; Tripathi, Anupriya ; Parida, Laxmi ; Carrieri, Anna Paola ; Beck, Kristen L. ; Das, Promi ; González, Antonio ; McDonald, Daniel ; Ladau, Joshua ; Karst, Søren M. ; Albertsen, Mads ; Ackermann, Gail ; DeReus, Jeff ; Thomas, Torsten ; Petras, Daniel ; Shade, Ashley ; Stegen, James ; Song, Se Jin ; Metz, Thomas O. ; Swafford, Austin D. ; Dorrestein, Pieter C. ; Jansson, Janet K. ; Gilbert, Jack A. ; Knight, Rob
    Publisher:London: Nature Publishing Group UK
    Journal title:Nature microbiology, 2022-12, Vol.7 (12), p.2128-2150
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    Author / Creator:Gauglitz, Julia M. ; West, Kiana A. ; Bittremieux, Wout ; Williams, Candace L. ; Weldon, Kelly C. ; Panitchpakdi, Morgan ; Di Ottavio, Francesca ; Aceves, Christine M. ; Brown, Elizabeth ; Sikora, Nicole C. ; Jarmusch, Alan K. ; Martino, Cameron ; Tripathi, Anupriya ; Meehan, Michael J. ; Dorrestein, Kathleen ; Shaffer, Justin P. ; Coras, Roxana ; Vargas, Fernando ; Goldasich, Lindsay DeRight ; Schwartz, Tara ; Bryant, MacKenzie ; Humphrey, Gregory ; Johnson, Abigail J. ; Spengler, Katharina ; Belda-Ferre, Pedro ; Diaz, Edgar ; McDonald, Daniel ; Zhu, Qiyun ; Elijah, Emmanuel O. ; Wang, Mingxun ; Marotz, Clarisse ; Sprecher, Kate E. ; Vargas-Robles, Daniela ; Withrow, Dana ; Ackermann, Gail ; Herrera, Lourdes ; Bradford, Barry J. ; Marques, Lucas Maciel Mauriz ; Amaral, Juliano Geraldo ; Silva, Rodrigo Moreira ; Veras, Flavio Protasio ; Cunha, Thiago Mattar ; Oliveira, Rene Donizeti Ribeiro ; Louzada-Junior, Paulo ; Mills, Robert H. ; Piotrowski, Paulina K. ; Servetas, Stephanie L. ; Da Silva, Sandra M. ; Jones, Christina M. ; Lin, Nancy J. ; Lippa, Katrice A. ; Jackson, Scott A. ; Daouk, Rima Kaddurah ; Galasko, Douglas ; Dulai, Parambir S. ; Kalashnikova, Tatyana I. ; Wittenberg, Curt ; Terkeltaub, Robert ; Doty, Megan M. ; Kim, Jae H. ; Rhee, Kyung E. ; Beauchamp-Walters, Julia ; Wright, Kenneth P. ; Dominguez-Bello, Maria Gloria ; Manary, Mark ; Oliveira, Michelli F. ; Boland, Brigid S. ; Lopes, Norberto Peporine ; Guma, Monica ; Swafford, Austin D. ; Dutton, Rachel J. ; Knight, Rob ; Dorrestein, Pieter C.
    Publisher:New York: Nature Publishing Group US
    Journal title:Nature biotechnology, 2023-11, Vol.41 (11), p.1656-1656
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    Author / Creator:Shaffer, Justin P ; Carpenter, Carolina S ; Martino, Cameron P ; Salido, Rodolfo A ; Mackenzie, Bryant ; Sanders, Karenina ; Schwartz, Tara ; Humphrey, Gregory ; Swafford, Austin D ; Knight, Rob
    Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
    Journal title:bioRxiv, 2022-05
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    Author / Creator:Shaffer, Justin P ; Carter, Morgan E ; Spraker, Joseph E ; Meara Clark ; Smith, Brian ; Kevin Loren Hockett ; Baltrus, David A ; Arnold, Elizabeth
    Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
    Journal title:bioRxiv, 2021-11
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    Author / Creator:Shaffer, Justin P ; Marotz, Clarisse ; Belda-Ferre, Pedro ; Martino, Cameron ; Wandro, Stephen ; Estaki, Mehrbod ; Salido, Rodolfo A ; Carpenter, Carolina S ; Zaramela, Livia S ; Minich, Jeremiah J ; Mackenzie, Bryant ; Sanders, Karenina ; Fraraccio, Serena ; Ackermann, Gail ; Humphrey, Gregory ; Swafford, Austin D ; Miller-Montgomery, Sandrine ; Knight, Rob
    Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
    Journal title:bioRxiv, 2020-11
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    Author / Creator:Minich, Jeremiah ; Ali, Farhana ; Marotz, Clarisse ; Belda-Ferre, Pedro ; Chiang, Leslie ; Shaffer, Justin P ; Carpenter, Carolina S ; McDonald, Daniel ; Gilbert, Jack ; Allard, Sarah M ; Allen, Eric E ; Knight, Rob ; Sweeney, Daniel A ; Swafford, Austin D
    Publisher:Durham: Research Square
    Date:2020-12
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    Author / Creator:Gauglitz, Julia M ; Bittremieux, Wout ; Williams, Candace L ; Weldon, Kelly C ; Panitchpakdi, Morgan W ; Francesca Di Ottavio ; Aceves, Christine M ; Brown, Elizabeth ; Sikora, Nicole C ; Jarmusch, Alan K ; Martino, Cameron ; Tripathi, Anupriya ; Sayyari, Erfan ; Shaffer, Justin ; Coras, Roxana ; Vargas, Fernando ; Goldasich, Lindsay Deright ; Schwartz, Tara ; Mackenzie, Bryant ; Humphrey, Gregory ; Johnson, Abigail J ; Spengler, Katharina ; Belda-Ferre, Pedro ; Diaz, Edgar ; Mcdonald, Daniel ; Zhu, Qiyun ; Nguyen, Dominic S ; Elijah, Emmanuel O ; Wang, Mingxun ; Marotz, Clarisse ; Sprecher, Kate E ; Vargas-Robles, Daniela ; Withrow, Dana ; Ackermann, Gail ; Herrera, Lourdes ; Bradford, Barry J ; Lucas Maciel Mauriz Marques ; Juliano Geraldo Amaral ; Rodrigo Moreira Silva ; Veras, Flavio Protaso ; Thiago Mattar Cunha ; Rene Donizeti Ribeiro Oliveira ; Louzada-Junior, Paulo ; Mills, Robert H ; Galasko, Douglas ; Dulai, Parambir S ; Wittenberg, Curt ; Gonzalez, David J ; Terkeltaub, Robert ; Doty, Megan M ; Kim, Jae H ; Rhee, Kyung E ; Beauchamp-Walters, Julia ; Wright, Kenneth P ; Dominguez Bello, Maria Gloria ; Manary, Mark ; Oliveira, Michelli F ; Boland, Brigid S ; Lopes, Norberto Peporine ; Guma, Monica ; Swafford, Austin D ; Dutton, Rachel J ; Knight, Rob ; Dorrestein, Pieter C
    Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
    Journal title:bioRxiv, 2020-07
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