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Klein, Allon M
Journal title:American Men & Women of Science : A Biographical Directory of Today’s Leaders in Physical, Biological and Related Sciences: ING-KNI, 2022, p.6075-6075
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Klein, Allon M
Journal title:American Men & Women of Science : A Biographical Directory of Today’s Leaders in Physical, Biological and Related Sciences: ING-KNI, 2021, p.6054-6054
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ArticlesPeer ReviewedFull Text
Lineage tracing meets single-cell omics: opportunities and challenges
Author / Creator:Wagner, Daniel E. ; Klein, Allon M.
Publisher:London: Nature Publishing Group UK
Journal title:Nature reviews. Genetics, 2020-07, Vol.21 (7), p.410-427
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ArticlesPeer ReviewedFull Text
The emergence of transcriptional identity in somatosensory neurons
Author / Creator:Sharma, Nikhil ; Flaherty, Kali ; Lezgiyeva, Karina ; Wagner, Daniel E. ; Klein, Allon M. ; Ginty, David D.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2020-01, Vol.577 (7790), p.392-398
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A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte
Author / Creator:Plasschaert, Lindsey W. ; Žilionis, Rapolas ; Choo-Wing, Rayman ; Savova, Virginia ; Knehr, Judith ; Roma, Guglielmo ; Klein, Allon M. ; Jaffe, Aron B.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2018-08, Vol.560 (7718), p.377-381
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ArticlesPeer ReviewedFull Text
Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo
Author / Creator:Wagner, Daniel E ; Weinreb, Caleb ; Collins, Zach M ; Briggs, James A ; Megason, Sean G ; Klein, Allon M
Publisher:United States: The American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2018-06, Vol.360 (6392), p.981-987
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ArticlesPeer ReviewedFull Text
Fundamental limits on dynamic inference from single-cell snapshots
Author / Creator:Weinreb, Caleb ; Wolock, Samuel ; Tusi, Betsabeh K. ; Socolovsky, Merav ; Klein, Allon M.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2018-03, Vol.115 (10), p.E2467-E2476
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ArticlesPeer ReviewedFull Text
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
Author / Creator:Raj, Bushra ; Wagner, Daniel E ; McKenna, Aaron ; Pandey, Shristi ; Klein, Allon M ; Shendure, Jay ; Gagnon, James A ; Schier, Alexander F
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2018-06, Vol.36 (5), p.442-450
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The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution
Author / Creator:Briggs, James A ; Weinreb, Caleb ; Wagner, Daniel E ; Megason, Sean ; Peshkin, Leonid ; Kirschner, Marc W ; Klein, Allon M
Publisher:United States: The American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2018-06, Vol.360 (6392)
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A comprehensive single cell transcriptional landscape of human hematopoietic progenitors
Author / Creator:Pellin, Danilo ; Loperfido, Mariana ; Baricordi, Cristina ; Wolock, Samuel L. ; Montepeloso, Annita ; Weinberg, Olga K. ; Biffi, Alessandra ; Klein, Allon M. ; Biasco, Luca
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2019-06, Vol.10 (1), p.2395-15, Article 2395
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ArticlesPeer ReviewedFull Text
Population snapshots predict early haematopoietic and erythroid hierarchies
Author / Creator:Tusi, Betsabeh Khoramian ; Wolock, Samuel L. ; Weinreb, Caleb ; Hwang, Yung ; Hidalgo, Daniel ; Zilionis, Rapolas ; Waisman, Ari ; Huh, Jun R. ; Klein, Allon M. ; Socolovsky, Merav
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2018-03, Vol.555 (7694), p.54-60
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ArticlesPeer ReviewedFull Text
Clonal analysis of lineage fate in native haematopoiesis
Author / Creator:Rodriguez-Fraticelli, Alejo E. ; Wolock, Samuel L. ; Weinreb, Caleb S. ; Panero, Riccardo ; Patel, Sachin H. ; Jankovic, Maja ; Sun, Jianlong ; Calogero, Raffaele A. ; Klein, Allon M. ; Camargo, Fernando D.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2018-01, Vol.553 (7687), p.212-216
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ArticlesPeer ReviewedFull Text
Intestinal Stem Cell Replacement Follows a Pattern of Neutral Drift
Author / Creator:Lopez-Garcia, Carlos ; Klein, Allon M ; Simons, Benjamin D ; Winton, Douglas J
Publisher:Washington, DC: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2010-11, Vol.330 (6005), p.822-825
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ArticlesPeer ReviewedFull Text
Spatiotemporal coordination of stem cell commitment during epidermal homeostasis
Author / Creator:Rompolas, Panteleimon ; Mesa, Kailin R. ; Kawaguchi, Kyogo ; Park, Sangbum ; Gonzalez, David ; Brown, Samara ; Boucher, Jonathan ; Klein, Allon M. ; Greco, Valentina
Publisher:United States: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2016-06, Vol.352 (6292), p.1471-1474
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ArticlesPeer ReviewedFull Text
A Single Progenitor Population Switches Behavior to Maintain and Repair Esophageal Epithelium
Author / Creator:Doupé, David P. ; Alcolea, Maria P. ; Roshan, Amit ; Zhang, Gen ; Klein, Allon M. ; Simons, Benjamin D. ; Jones, Philip H.
Publisher:Washington, DC: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2012-08, Vol.337 (6098), p.1091-1093
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ArticlesPeer ReviewedFull Text
Cell‐to‐cell variability of alternative RNA splicing
Author / Creator:Waks, Zeev ; Klein, Allon M ; Silver, Pamela A
Publisher:London: Nature Publishing Group UK
Journal title:Molecular systems biology, 2011-07, Vol.7 (1), p.506-n/a
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ArticlesPeer ReviewedFull Text
Stochastic fate of p53-mutant epidermal progenitor cells is tilted toward proliferation by UV B during preneoplasia
Author / Creator:Klein, Allon M ; Brash, Douglas E ; Jones, Philip H ; Simons, Benjamin D
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2010-01, Vol.107 (1), p.270-275
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ArticlesPeer ReviewedFull Text
Single-cell gene expression reveals a landscape of regulatory T cell phenotypes shaped by the TCR
Author / Creator:Zemmour, David ; Zilionis, Rapolas ; Kiner, Evgeny ; Klein, Allon M. ; Mathis, Diane ; Benoist, Christophe
Publisher:New York: Nature Publishing Group US
Journal title:Nature immunology, 2018-03, Vol.19 (3), p.291-301
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ArticlesPeer ReviewedFull Text
Basolateral junction proteins regulate competition for the follicle stem cell niche in the Drosophila ovary
Author / Creator:Kronen, Maria R ; Schoenfelder, Kevin P ; Klein, Allon M ; Nystul, Todd G
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-07, Vol.9 (7), p.e101085-e101085
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ArticlesPeer ReviewedFull Text
Single-cell barcoding and sequencing using droplet microfluidics
Author / Creator:Zilionis, Rapolas ; Nainys, Juozas ; Veres, Adrian ; Savova, Virginia ; Zemmour, David ; Klein, Allon M ; Mazutis, Linas
Publisher:London: Nature Publishing Group UK
Journal title:Nature protocols, 2017-01, Vol.12 (1), p.44-73
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Klein, Allon M

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Klein, Allon M

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Lineage tracing meets single-cell omics: opportunities and challenges

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The emergence of transcriptional identity in somatosensory neurons

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A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte

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Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo

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Fundamental limits on dynamic inference from single-cell snapshots

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Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

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The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution

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A comprehensive single cell transcriptional landscape of human hematopoietic progenitors

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Population snapshots predict early haematopoietic and erythroid hierarchies

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Clonal analysis of lineage fate in native haematopoiesis

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Intestinal Stem Cell Replacement Follows a Pattern of Neutral Drift

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Spatiotemporal coordination of stem cell commitment during epidermal homeostasis

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A Single Progenitor Population Switches Behavior to Maintain and Repair Esophageal Epithelium

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Cell‐to‐cell variability of alternative RNA splicing

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Stochastic fate of p53-mutant epidermal progenitor cells is tilted toward proliferation by UV B during preneoplasia

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Single-cell gene expression reveals a landscape of regulatory T cell phenotypes shaped by the TCR

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Basolateral junction proteins regulate competition for the follicle stem cell niche in the Drosophila ovary

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Single-cell barcoding and sequencing using droplet microfluidics

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