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ArticlesPeer ReviewedFull Text
Single Cell Genomics: Advances and Future Perspectives
Author / Creator:Macaulay, Iain C. ; Voet, Thierry
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2014-01, Vol.10 (1), p.e1004126-e1004126
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Power analysis of single-cell RNA-sequencing experiments
Author / Creator:Svensson, Valentine ; Natarajan, Kedar Nath ; Ly, Lam-Ha ; Miragaia, Ricardo J. ; Labalette, Charlotte ; Macaulay, Iain C. ; Cvejic, Ana ; Teichmann, Sarah A.
Publisher:New York: Springer Nature
Journal title:Nature methods, 2017-04, Vol.14 (4), p.381-387
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Pluripotent state transitions coordinate morphogenesis in mouse and human embryos
Author / Creator:Shahbazi, Marta N. ; Scialdone, Antonio ; Skorupska, Natalia ; Weberling, Antonia ; Recher, Gaelle ; Zhu, Meng ; Jedrusik, Agnieszka ; Devito, Liani G. ; Noli, Laila ; Macaulay, Iain C. ; Buecker, Christa ; Khalaf, Yakoub ; Ilic, Dusko ; Voet, Thierry ; Marioni, John C. ; Zernicka-Goetz, Magdalena
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2017-12, Vol.552 (7684), p.239-243
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Separation and parallel sequencing of the genomes and transcriptomes of single cells using G&T-seq
Author / Creator:Macaulay, Iain C ; Teng, Mabel J ; Haerty, Wilfried ; Kumar, Parveen ; Ponting, Chris P ; Voet, Thierry
Publisher:London: Nature Publishing Group UK
Journal title:Nature protocols, 2016-11, Vol.11 (11), p.2081-2103
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Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity
Author / Creator:Angermueller, Christof ; Clark, Stephen J ; Lee, Heather J ; Macaulay, Iain C ; Teng, Mabel J ; Hu, Tim Xiaoming ; Krueger, Felix ; Smallwood, Sébastien A ; Ponting, Chris P ; Voet, Thierry ; Kelsey, Gavin ; Stegle, Oliver ; Reik, Wolf
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2016-03, Vol.13 (3), p.229-232
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Resolving early mesoderm diversification through single-cell expression profiling
Author / Creator:Scialdone, Antonio ; Tanaka, Yosuke ; Jawaid, Wajid ; Moignard, Victoria ; Wilson, Nicola K. ; Macaulay, Iain C. ; Marioni, John C. ; Göttgens, Berthold
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2016-07, Vol.535 (7611), p.289-293
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Decoding the regulatory network of early blood development from single-cell gene expression measurements
Author / Creator:Moignard, Victoria ; Woodhouse, Steven ; Haghverdi, Laleh ; Lilly, Andrew J ; Tanaka, Yosuke ; Wilkinson, Adam C ; Buettner, Florian ; Macaulay, Iain C ; Jawaid, Wajid ; Diamanti, Evangelia ; Nishikawa, Shin-Ichi ; Piterman, Nir ; Kouskoff, Valerie ; Theis, Fabian J ; Fisher, Jasmin ; Göttgens, Berthold
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2015-03, Vol.33 (3), p.269-276
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G&T-seq: parallel sequencing of single-cell genomes and transcriptomes
Author / Creator:Macaulay, Iain C ; Haerty, Wilfried ; Kumar, Parveen ; Li, Yang I ; Hu, Tim Xiaoming ; Teng, Mabel J ; Goolam, Mubeen ; Saurat, Nathalie ; Coupland, Paul ; Shirley, Lesley M ; Smith, Miriam ; Van der Aa, Niels ; Banerjee, Ruby ; Ellis, Peter D ; Quail, Michael A ; Swerdlow, Harold P ; Zernicka-Goetz, Magdalena ; Livesey, Frederick J ; Ponting, Chris P ; Voet, Thierry
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2015-06, Vol.12 (6), p.519-522
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Identification of a non-canonical ciliate nuclear genetic code where UAA and UAG code for different amino acids
Author / Creator:McGowan, Jamie ; Kilias, Estelle S. ; Alacid, Elisabet ; Lipscombe, James ; Jenkins, Benjamin H. ; Gharbi, Karim ; Kaithakottil, Gemy G. ; Macaulay, Iain C. ; McTaggart, Seanna ; Warring, Sally D. ; Richards, Thomas A. ; Hall, Neil ; Swarbreck, David
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2023-10, Vol.19 (10), p.e1010913-e1010913
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Free fatty-acid transport via CD36 drives β-oxidation-mediated hematopoietic stem cell response to infection
Author / Creator:Mistry, Jayna J. ; Hellmich, Charlotte ; Moore, Jamie A. ; Jibril, Aisha ; Macaulay, Iain ; Moreno-Gonzalez, Mar ; Di Palma, Federica ; Beraza, Naiara ; Bowles, Kristian M. ; Rushworth, Stuart A.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-12, Vol.12 (1), p.7130-7130, Article 7130
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ArticlesPeer ReviewedFull Text
Characterization of transcriptional networks in blood stem and progenitor cells using high-throughput single-cell gene expression analysis
Author / Creator:Moignard, Victoria ; Macaulay, Iain C. ; Swiers, Gemma ; Buettner, Florian ; Schütte, Judith ; Calero-Nieto, Fernando J. ; Kinston, Sarah ; Joshi, Anagha ; Hannah, Rebecca ; Theis, Fabian J. ; Jacobsen, Sten Eirik ; de Bruijn, Marella F. ; Göttgens, Berthold
Publisher:London: Nature Publishing Group UK
Journal title:Nature cell biology, 2013-04, Vol.15 (4), p.363-372
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Single-cell RNA sequencing reveals molecular and functional platelet bias of aged haematopoietic stem cells
Author / Creator:Grover, Amit ; Sanjuan-Pla, Alejandra ; Thongjuea, Supat ; Carrelha, Joana ; Giustacchini, Alice ; Gambardella, Adriana ; Macaulay, Iain ; Mancini, Elena ; Luis, Tiago C. ; Mead, Adam ; Jacobsen, Sten Eirik W. ; Nerlov, Claus
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2016-03, Vol.7 (1), p.11075-11075, Article 11075
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Genome-wide in vivo screen identifies novel host regulators of metastatic colonization
Author / Creator:van der Weyden, Louise ; Arends, Mark J. ; Campbell, Andrew D. ; Bald, Tobias ; Wardle-Jones, Hannah ; Griggs, Nicola ; Velasco-Herrera, Martin Del Castillo ; Tüting, Thomas ; Sansom, Owen J. ; Karp, Natasha A. ; Clare, Simon ; Gleeson, Diane ; Ryder, Edward ; Galli, Antonella ; Tuck, Elizabeth ; Cambridge, Emma L. ; Voet, Thierry ; Macaulay, Iain C. ; Wong, Kim ; Spiegel, Sarah ; Speak, Anneliese O. ; Adams, David J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2017-01, Vol.541 (7636), p.233-236
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ROS-mediated PI3K activation drives mitochondrial transfer from stromal cells to hematopoietic stem cells in response to infection
Author / Creator:Mistry, Jayna J. ; Marlein, Christopher R. ; Moore, Jamie A. ; Hellmich, Charlotte ; Wojtowicz, Edyta E. ; Smith, James G. W. ; Macaulay, Iain ; Sun, Yu ; Morfakis, Adam ; Patterson, Angela ; Horton, Rebecca H. ; Divekar, Devina ; Morris, Christopher J. ; Haestier, Anna ; Di Palma, Federica ; Beraza, Naiara ; Bowles, Kristian M. ; Rushworth, Stuart A.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2019-12, Vol.116 (49), p.24610-24619
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Perivascular niche cells sense thrombocytopenia and activate hematopoietic stem cells in an IL-1 dependent manner
Author / Creator:Luis, Tiago C. ; Barkas, Nikolaos ; Carrelha, Joana ; Giustacchini, Alice ; Mazzi, Stefania ; Norfo, Ruggiero ; Wu, Bishan ; Aliouat, Affaf ; Guerrero, Jose A. ; Rodriguez-Meira, Alba ; Bouriez-Jones, Tiphaine ; Macaulay, Iain C. ; Jasztal, Maria ; Zhu, Guangheng ; Ni, Heyu ; Robson, Matthew J. ; Blakely, Randy D. ; Mead, Adam J. ; Nerlov, Claus ; Ghevaert, Cedric ; Jacobsen, Sten Eirik W.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-09, Vol.14 (1), p.6062-6062, Article 6062
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Common clonal origin of conventional T cells and induced regulatory T cells in breast cancer patients
Author / Creator:Xydia, Maria ; Rahbari, Raheleh ; Ruggiero, Eliana ; Macaulay, Iain ; Tarabichi, Maxime ; Lohmayer, Robert ; Wilkening, Stefan ; Michels, Tillmann ; Brown, Daniel ; Vanuytven, Sebastiaan ; Mastitskaya, Svetlana ; Laidlaw, Sean ; Grabe, Niels ; Pritsch, Maria ; Fronza, Raffaele ; Hexel, Klaus ; Schmitt, Steffen ; Müller-Steinhardt, Michael ; Halama, Niels ; Domschke, Christoph ; Schmidt, Manfred ; von Kalle, Christof ; Schütz, Florian ; Voet, Thierry ; Beckhove, Philipp
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-02, Vol.12 (1), p.1119-18, Article 1119
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Single-cell gene and isoform expression analysis reveals signatures of ageing in haematopoietic stem and progenitor cells
Author / Creator:Mincarelli, Laura ; Uzun, Vladimir ; Wright, David ; Scoones, Anita ; Rushworth, Stuart A. ; Haerty, Wilfried ; Macaulay, Iain C.
Publisher:London: Nature Publishing Group UK
Journal title:Communications biology, 2023-05, Vol.6 (1), p.558-558, Article 558
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Spatially resolved transcriptomics reveals plant host responses to pathogens
Author / Creator:Giolai, Michael ; Verweij, Walter ; Lister, Ashleigh ; Heavens, Darren ; Macaulay, Iain ; Clark, Matthew D.
Publisher:England: BioMed Central Ltd
Journal title:Plant methods, 2019-10, Vol.15 (1), p.114-114, Article 114
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The earliest thymic T cell progenitors sustain B cell and myeloid lineage potential
Author / Creator:Luc, Sidinh ; Luis, Tiago C ; Boukarabila, Hanane ; Macaulay, Iain C ; Buza-Vidas, Natalija ; Bouriez-Jones, Tiphaine ; Lutteropp, Michael ; Woll, Petter S ; Loughran, Stephen J ; Mead, Adam J ; Hultquist, Anne ; Brown, John ; Mizukami, Takuo ; Matsuoka, Sahoko ; Ferry, Helen ; Anderson, Kristina ; Duarte, Sara ; Atkinson, Deborah ; Soneji, Shamit ; Domanski, Aniela ; Farley, Alison ; Sanjuan-Pla, Alejandra ; Carella, Cintia ; Patient, Roger ; de Bruijn, Marella ; Enver, Tariq ; Nerlov, Claus ; Blackburn, Clare ; Godin, Isabelle ; Jacobsen, Sten Eirik W
Publisher:New York: Nature Publishing Group US
Journal title:Nature immunology, 2012-04, Vol.13 (4), p.412-419
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ArticlesPeer ReviewedFull Text
Integrin Based Isolation Enables Purification of Murine Lineage Committed Cardiomyocytes
Author / Creator:Tarnawski, Laura ; Xian, Xiaojie ; Monnerat, Gustavo ; Macaulay, Iain C. ; Malan, Daniela ; Borgman, Andrew ; Wu, Sean M. ; Fleischmann, Bernd K. ; Jovinge, Stefan
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015, Vol.10 (8), p.e0135880
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Showing 1 to 20 of 55 results

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Single Cell Genomics: Advances and Future Perspectives

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Power analysis of single-cell RNA-sequencing experiments

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Pluripotent state transitions coordinate morphogenesis in mouse and human embryos

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Separation and parallel sequencing of the genomes and transcriptomes of single cells using G&T-seq

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Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity

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Resolving early mesoderm diversification through single-cell expression profiling

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Decoding the regulatory network of early blood development from single-cell gene expression measurements

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G&T-seq: parallel sequencing of single-cell genomes and transcriptomes

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Identification of a non-canonical ciliate nuclear genetic code where UAA and UAG code for different amino acids

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Free fatty-acid transport via CD36 drives β-oxidation-mediated hematopoietic stem cell response to infection

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Characterization of transcriptional networks in blood stem and progenitor cells using high-throughput single-cell gene expression analysis

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Single-cell RNA sequencing reveals molecular and functional platelet bias of aged haematopoietic stem cells

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Genome-wide in vivo screen identifies novel host regulators of metastatic colonization

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ROS-mediated PI3K activation drives mitochondrial transfer from stromal cells to hematopoietic stem cells in response to infection

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Perivascular niche cells sense thrombocytopenia and activate hematopoietic stem cells in an IL-1 dependent manner

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Common clonal origin of conventional T cells and induced regulatory T cells in breast cancer patients

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Single-cell gene and isoform expression analysis reveals signatures of ageing in haematopoietic stem and progenitor cells

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Spatially resolved transcriptomics reveals plant host responses to pathogens

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The earliest thymic T cell progenitors sustain B cell and myeloid lineage potential

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Integrin Based Isolation Enables Purification of Murine Lineage Committed Cardiomyocytes

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