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ArticlesPeer ReviewedFull Text
Specific inhibition of splicing factor activity by decoy RNA oligonucleotides
Author / Creator:Denichenko, Polina ; Mogilevsky, Maxim ; Cléry, Antoine ; Welte, Thomas ; Biran, Jakob ; Shimshon, Odelia ; Barnabas, Georgina D. ; Danan-Gotthold, Miri ; Kumar, Saran ; Yavin, Eylon ; Levanon, Erez Y. ; Allain, Frédéric H. ; Geiger, Tamar ; Levkowitz, Gil ; Karni, Rotem
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2019-04, Vol.10 (1), p.1590-1590, Article 1590
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Structural basis of a small molecule targeting RNA for a specific splicing correction
Author / Creator:Campagne, Sébastien ; Boigner, Sarah ; Rüdisser, Simon ; Moursy, Ahmed ; Gillioz, Laurent ; Knörlein, Anna ; Hall, Jonathan ; Ratni, Hasane ; Cléry, Antoine ; Allain, Frédéric H.-T.
Publisher:New York: Nature Publishing Group US
Journal title:Nature chemical biology, 2019-12, Vol.15 (12), p.1191-1198
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Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing
Author / Creator:Cléry, Antoine ; Krepl, Miroslav ; Nguyen, Cristina K. X. ; Moursy, Ahmed ; Jorjani, Hadi ; Katsantoni, Maria ; Okoniewski, Michal ; Mittal, Nitish ; Zavolan, Mihaela ; Sponer, Jiri ; Allain, Frédéric H.-T.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-01, Vol.12 (1), p.428-12, Article 428
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Isolated pseudo–RNA-recognition motifs of SR proteins can regulate splicing using a noncanonical mode of RNA recognition
Author / Creator:Cléry, Antoine ; Sinha, Rahul ; Anczuków, Olga ; Corrionero, Anna ; Moursy, Ahmed ; Daubner, Gerrit M ; Valcárcel, Juan ; Krainer, Adrian R ; Allain, Frédéric H-T
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2013-07, Vol.110 (30), p.E2802-E2811
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RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing
Author / Creator:Moursy, Ahmed ; Cléry, Antoine ; Gerhardy, Stefan ; Betz, Katharina M. ; Rao, Sanjana ; Mazur, Jarosław ; Campagne, Sébastien ; Beusch, Irene ; Duszczyk, Malgorzata M. ; Robinson, Mark D. ; Panse, Vikram Govind ; Allain, Frédéric H.-T.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-11, Vol.14 (1), p.7166-7166, Article 7166
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Control of the polyamine biosynthesis pathway by G2-quadruplexes
Author / Creator:Lightfoot, Helen Louise ; Hagen, Timo ; Cléry, Antoine ; Allain, Frédéric Hai-Trieu ; Hall, Jonathan
Publisher:Cambridge: eLife Sciences Publications Ltd
Journal title:eLife, 2018-07, Vol.7
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Tandem hnRNP A1 RNA recognition motifs act in concert to repress the splicing of survival motor neuron exon 7
Author / Creator:Beusch, Irene ; Barraud, Pierre ; Moursy, Ahmed ; Cléry, Antoine ; Allain, Frédéric Hai-Trieu
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2017-06, Vol.6
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Binding to SMN2 pre-mRNA-protein complex elicits specificity for small molecule splicing modifiers
Author / Creator:Sivaramakrishnan, Manaswini ; McCarthy, Kathleen D. ; Campagne, Sébastien ; Huber, Sylwia ; Meier, Sonja ; Augustin, Angélique ; Heckel, Tobias ; Meistermann, Hélène ; Hug, Melanie N. ; Birrer, Pascale ; Moursy, Ahmed ; Khawaja, Sarah ; Schmucki, Roland ; Berntenis, Nikos ; Giroud, Nicolas ; Golling, Sabrina ; Tzouros, Manuel ; Banfai, Balazs ; Duran-Pacheco, Gonzalo ; Lamerz, Jens ; Hsiu Liu, Ying ; Luebbers, Thomas ; Ratni, Hasane ; Ebeling, Martin ; Cléry, Antoine ; Paushkin, Sergey ; Krainer, Adrian R. ; Allain, Frédéric H.-T. ; Metzger, Friedrich
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2017-11, Vol.8 (1), p.1476-13, Article 1476
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Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-β1
Author / Creator:Cléry, Antoine ; Jayne, Sandrine ; Benderska, Natalya ; Dominguez, Cyril ; Stamm, Stefan ; Allain, Frédéric H-T
Publisher:New York: Nature Publishing Group US
Journal title:Nature structural & molecular biology, 2011-04, Vol.18 (4), p.443-450
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Plastidial NAD-Dependent Malate Dehydrogenase: A Moonlighting Protein Involved in Early Chloroplast Development through Its Interaction with an FtsH12-FtsHi Protease Complex
Author / Creator:Schreier, Tina B. ; Cléry, Antoine ; Schläfli, Michael ; Galbier, Florian ; Stadler, Martha ; Demarsy, Emilie ; Albertini, Daniele ; Maier, Benjamin A. ; Kessler, Felix ; Hörtensteiner, Stefan ; Zeeman, Samuel C. ; Kötting, Oliver
Publisher:United States: American Society of Plant Biologists
Journal title:The Plant cell, 2018-08, Vol.30 (8), p.1745-1769
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A syn-anti conformational difference allows SRSF2 to recognize guanines and cytosines equally well
Author / Creator:Daubner, Gerrit M ; Cléry, Antoine ; Jayne, Sandrine ; Stevenin, James ; Allain, Frédéric H-T
Publisher:Chichester, UK: John Wiley & Sons, Ltd
Journal title:The EMBO journal, 2012-01, Vol.31 (1), p.162-174
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Control of the polyamine biosynthesis pathway by G.sub.2-quadruplexes
Author / Creator:Lightfoot, Helen Louise ; Hagen, Timo ; Cléry, Antoine ; Allain, Frédéric Hai-Trieu ; Hall, Jonathan
Publisher:eLife Science Publications, Ltd
Journal title:eLife, 2018-07, Vol.7
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Control of the polyamine biosynthesis pathway by G 2 -quadruplexes
Author / Creator:Lightfoot, Helen Louise ; Hagen, Timo ; Cléry, Antoine ; Allain, Frédéric Hai-Trieu ; Hall, Jonathan
Publisher:England
Journal title:eLife, 2018-07, Vol.7
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A syn - anti conformational difference allows SRSF2 to recognize guanines and cytosines equally well: SRSF2 recognizes anti C and syn G equally well
Author / Creator:Daubner, Gerrit M ; Cléry, Antoine ; Jayne, Sandrine ; Stevenin, James ; Allain, Frédéric H-T
Journal title:The EMBO journal, 2012-01, Vol.31 (1), p.162-174
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Isolated pseudo-RNA-recognition motifs of SR proteins can regulate splicing using a noncanonical mode of RNA recognition
Author / Creator:Cléry, Antoine ; Sinha, Rahul ; Anczuków, Olga ; Corrionero, Anna ; Moursy, Ahmed ; Daubner, Gerrit M. ; Valcárcel, Juan ; Krainer, Adrian R. ; Allain, Frédéric H.-T.
Publisher:National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2013-07, Vol.110 (30), p.12171-12171
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Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-[beta]1
Author / Creator:Cléry, Antoine ; Jayne, Sandrine ; Benderska, Natalya ; Dominguez, Cyril ; Stamm, Stefan ; Allain, Frédéric H-t
Publisher:New York: Nature Publishing Group
Journal title:Nature structural & molecular biology, 2011-04, Vol.18 (4), p.443
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Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2- beta 1
Author / Creator:Clery, Antoine ; Jayne, Sandrine ; Benderska, Natalya ; Dominguez, Cyril ; Stamm, Stefan ; Allain, Frederic H-T
Journal title:Nature structural & molecular biology, 2011-04, Vol.18 (4), p.443-450
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Structural basis for Cas9 off-target activity
Author / Creator:Pacesa, Martin ; Chun-Han, Lin ; Clery, Antoine ; Saha, Aakaash ; Arantes, Pablo R ; Bargsten, Katja ; Irby, Matthew J ; Allain, Frederic H ; Palermo, Giulia ; Cameron, Peter ; Donohoue, Paul D ; Jinek, Martin
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-07
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The structure of yeast Npl3 bound to RNA reveals a cooperative sequence-specific recognition and an RNA chaperone role in splicing
Author / Creator:Moursy, Ahmed ; Clery, Antoine ; Gerhardy, Stefan ; Betz, Katharina M ; Rao, Sanjana ; Campagne, Sebastien ; Beusch, Irene ; Duszczyk, Malgorzata M ; Robinson, Mark D ; Vikram Govind Panse ; Allain, Frederic H-T
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-05
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TDP-43 oligomerization and RNA binding are codependent but their loss elicits distinct pathologies
Author / Creator:Pérez-Berlanga, Manuela ; Wiersma, Vera I ; Zbinden, Aurélie ; De Vos, Laura ; Wagner, Ulrich ; Foglieni, Chiara ; Mallona, Izaskun ; Betz, Katharina M ; Cléry, Antoine ; Weber, Julien ; Guo, Zhongning ; Rigort, Ruben ; De Rossi, Pierre ; Manglunia, Ruchi ; Tantardini, Elena ; Sahadevan, Sonu ; Stach, Oliver ; Hruska-Plochan, Marian ; Allain, Frederic H-T ; Paganetti, Paolo ; Polymenidou, Magdalini
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-05
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Specific inhibition of splicing factor activity by decoy RNA oligonucleotides

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Structural basis of a small molecule targeting RNA for a specific splicing correction

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Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing

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Isolated pseudo–RNA-recognition motifs of SR proteins can regulate splicing using a noncanonical mode of RNA recognition

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RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing

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Control of the polyamine biosynthesis pathway by G2-quadruplexes

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Tandem hnRNP A1 RNA recognition motifs act in concert to repress the splicing of survival motor neuron exon 7

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Binding to SMN2 pre-mRNA-protein complex elicits specificity for small molecule splicing modifiers

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Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-β1

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Plastidial NAD-Dependent Malate Dehydrogenase: A Moonlighting Protein Involved in Early Chloroplast Development through Its Interaction with an FtsH12-FtsHi Protease Complex

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A syn-anti conformational difference allows SRSF2 to recognize guanines and cytosines equally well

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Control of the polyamine biosynthesis pathway by G.sub.2-quadruplexes

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Control of the polyamine biosynthesis pathway by G 2 -quadruplexes

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A syn - anti conformational difference allows SRSF2 to recognize guanines and cytosines equally well: SRSF2 recognizes anti C and syn G equally well

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Isolated pseudo-RNA-recognition motifs of SR proteins can regulate splicing using a noncanonical mode of RNA recognition

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Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-[beta]1

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Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2- beta 1

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Structural basis for Cas9 off-target activity

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The structure of yeast Npl3 bound to RNA reveals a cooperative sequence-specific recognition and an RNA chaperone role in splicing

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TDP-43 oligomerization and RNA binding are codependent but their loss elicits distinct pathologies

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