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Integrated genomics and proteomics define huntingtin CAG length–dependent networks in mice
Author / Creator:Langfelder, Peter ; Cantle, Jeffrey P ; Chatzopoulou, Doxa ; Wang, Nan ; Gao, Fuying ; Al-Ramahi, Ismael ; Lu, Xiao-Hong ; Ramos, Eliana Marisa ; El-Zein, Karla ; Zhao, Yining ; Deverasetty, Sandeep ; Tebbe, Andreas ; Schaab, Christoph ; Lavery, Daniel J ; Howland, David ; Kwak, Seung ; Botas, Juan ; Aaronson, Jeffrey S ; Rosinski, Jim ; Coppola, Giovanni ; Horvath, Steve ; Yang, X William
Publisher:New York: Nature Publishing Group US
Journal title:Nature neuroscience, 2016-04, Vol.19 (4), p.623-633
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Network Organization of the Huntingtin Proteomic Interactome in Mammalian Brain
Author / Creator:Shirasaki, Dyna I. ; Greiner, Erin R. ; Al-Ramahi, Ismael ; Gray, Michelle ; Boontheung, Pinmanee ; Geschwind, Daniel H. ; Botas, Juan ; Coppola, Giovanni ; Horvath, Steve ; Loo, Joseph A. ; Yang, X. William
Publisher:United States: Elsevier Inc
Journal title:Neuron (Cambridge, Mass.), 2012-07, Vol.75 (1), p.41-57
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Functional variants identify sex-specific genes and pathways in Alzheimer’s Disease
Author / Creator:Bourquard, Thomas ; Lee, Kwanghyuk ; Al-Ramahi, Ismael ; Pham, Minh ; Shapiro, Dillon ; Lagisetty, Yashwanth ; Soleimani, Shirin ; Mota, Samantha ; Wilhelm, Kevin ; Samieinasab, Maryam ; Kim, Young Won ; Huh, Eunna ; Asmussen, Jennifer ; Katsonis, Panagiotis ; Botas, Juan ; Lichtarge, Olivier
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-05, Vol.14 (1), p.2765-2765, Article 2765
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Cross-species genetic screens identify transglutaminase 5 as a regulator of polyglutamine-expanded ataxin-1
Author / Creator:Lee, Won-Seok ; Al-Ramahi, Ismael ; Jeong, Hyun-Hwan ; Jang, Youjin ; Lin, Tao ; Adamski, Carolyn J. ; Lavery, Laura A. ; Rath, Smruti ; Richman, Ronald ; Bondar, Vitaliy V. ; Alcala, Elizabeth ; Revelli, Jean-Pierre ; Orr, Harry T. ; Liu, Zhandong ; Botas, Juan ; Zoghbi, Huda Y.
Publisher:United States: American Society for Clinical Investigation
Journal title:The Journal of clinical investigation, 2022-05, Vol.132 (9)
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RAS–MAPK–MSK1 pathway modulates ataxin 1 protein levels and toxicity in SCA1
Author / Creator:Park, Jeehye ; Al-Ramahi, Ismael ; Tan, Qiumin ; Mollema, Nissa ; Diaz-Garcia, Javier R. ; Gallego-Flores, Tatiana ; Lu, Hsiang-Chih ; Lagalwar, Sarita ; Duvick, Lisa ; Kang, Hyojin ; Lee, Yoontae ; Jafar-Nejad, Paymaan ; Sayegh, Layal S. ; Richman, Ronald ; Liu, Xiuyun ; Gao, Yan ; Shaw, Chad A. ; Arthur, J. Simon C. ; Orr, Harry T. ; Westbrook, Thomas F. ; Botas, Juan ; Zoghbi, Huda Y.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2013-06, Vol.498 (7454), p.325-331
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Functional screening of lysosomal storage disorder genes identifies modifiers of alpha-synuclein neurotoxicity
Author / Creator:Yu, Meigen ; Ye, Hui ; De-Paula, Ruth B. ; Mangleburg, Carl Grant ; Wu, Timothy ; Lee, Tom V. ; Li, Yarong ; Duong, Duc ; Phillips, Bridget ; Cruchaga, Carlos ; Allen, Genevera I. ; Seyfried, Nicholas T. ; Al-Ramahi, Ismael ; Botas, Juan ; Shulman, Joshua M.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2023-05, Vol.19 (5), p.e1010760-e1010760
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TRIM28 regulates the nuclear accumulation and toxicity of both alpha-synuclein and tau
Author / Creator:Rousseaux, Maxime WC ; de Haro, Maria ; Lasagna-Reeves, Cristian A ; De Maio, Antonia ; Park, Jeehye ; Jafar-Nejad, Paymaan ; Al-Ramahi, Ismael ; Sharma, Ajay ; See, Lauren ; Lu, Nan ; Vilanova-Velez, Luis ; Klisch, Tiemo J ; Westbrook, Thomas F ; Troncoso, Juan C ; Botas, Juan ; Zoghbi, Huda Y
Publisher:England: eLife Science Publications, Ltd
Journal title:eLife, 2016-10, Vol.5
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Tau polarizes an aging transcriptional signature to excitatory neurons and glia
Author / Creator:Wu, Timothy ; Deger, Jennifer M ; Ye, Hui ; Guo, Caiwei ; Dhindsa, Justin ; Pekarek, Brandon T ; Al-Ouran, Rami ; Liu, Zhandong ; Al-Ramahi, Ismael ; Botas, Juan ; Shulman, Joshua M
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2023-05, Vol.12
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TORC1 Inhibition by Rapamycin Promotes Antioxidant Defences in a Drosophila Model of Friedreich’s Ataxia
Author / Creator:Calap-Quintana, Pablo ; Soriano, Sirena ; Llorens, José Vicente ; Al-Ramahi, Ismael ; Botas, Juan ; Moltó, María Dolores ; Martínez-Sebastián, María José
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-07, Vol.10 (7), p.e0132376-e0132376
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A striatal-enriched intronic GPCR modulates huntingtin levels and toxicity
Author / Creator:Yao, Yuwei ; Cui, Xiaotian ; Al-Ramahi, Ismael ; Sun, Xiaoli ; Li, Bo ; Hou, Jiapeng ; Difiglia, Marian ; Palacino, James ; Wu, Zhi-Ying ; Ma, Lixiang ; Botas, Juan ; Lu, Boxun
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2015-03, Vol.4
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Downregulation of glial genes involved in synaptic function mitigates Huntington's disease pathogenesis
Author / Creator:Onur, Tarik Seref ; Laitman, Andrew ; Zhao, He ; Keyho, Ryan ; Kim, Hyemin ; Wang, Jennifer ; Mair, Megan ; Wang, Huilan ; Li, Lifang ; Perez, Alma ; de Haro, Maria ; Wan, Ying-Wooi ; Allen, Genevera ; Lu, Boxun ; Al-Ramahi, Ismael ; Liu, Zhandong ; Botas, Juan
Publisher:England: eLife Science Publications, Ltd
Journal title:eLife, 2021-04, Vol.10
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Inhibition of PIP4Kγ ameliorates the pathological effects of mutant huntingtin protein
Author / Creator:Al-Ramahi, Ismael ; Giridharan, Sai Srinivas Panapakkam ; Chen, Yu-Chi ; Patnaik, Samarjit ; Safren, Nathaniel ; Hasegawa, Junya ; de Haro, Maria ; Wagner Gee, Amanda K ; Titus, Steven A ; Jeong, Hyunkyung ; Clarke, Jonathan ; Krainc, Dimitri ; Zheng, Wei ; Irvine, Robin F ; Barmada, Sami ; Ferrer, Marc ; Southall, Noel ; Weisman, Lois S ; Botas, Juan ; Marugan, Juan Jose
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2017-12, Vol.6
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Metal Homeostasis Regulators Suppress FRDA Phenotypes in a Drosophila Model of the Disease
Author / Creator:Soriano, Sirena ; Calap-Quintana, Pablo ; Llorens, José Vicente ; Al-Ramahi, Ismael ; Gutiérrez, Lucía ; Martínez-Sebastián, María José ; Botas, Juan ; Moltó, María Dolores
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-07, Vol.11 (7), p.e0159209-e0159209
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Longitudinal multi-omics in alpha-synuclein Drosophila model discriminates disease- from age-associated pathologies in Parkinson’s disease
Author / Creator:Moore, Justin ; Wu, Timothy ; Dhindsa, Justin ; El Fadel, Omar ; Le, Anh ; Perez, Alma ; Amoh, Bismark ; Tarkunde, Akash ; Zhu, Katy F. ; Avalos, Matthew ; Dammer, Eric B. ; Duong, Duc M. ; Seyfried, Nicholas T. ; Shulman, Joshua M. ; Al-Ramahi, Ismael ; Botas, Juan
Publisher:London: Nature Publishing Group UK
Journal title:NPJ Parkinson's Disease, 2025-03, Vol.11 (1), p.46-13, Article 46
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Detailed analysis of leucokinin-expressing neurons and their candidate functions in the Drosophila nervous system
Author / Creator:de Haro, María ; Al-Ramahi, Ismael ; Benito-Sipos, Jonathan ; López-Arias, Begoña ; Dorado, Belén ; Veenstra, Jan A ; Herrero, Pilar
Publisher:Berlin/Heidelberg: Berlin/Heidelberg : Springer-Verlag
Journal title:Cell and tissue research, 2010-02, Vol.339 (2), p.321-336
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A Genome-Scale RNA–Interference Screen Identifies RRAS Signaling as a Pathologic Feature of Huntington's Disease
Author / Creator:Miller, John P. ; Yates, Bridget E. ; Al-Ramahi, Ismael ; Berman, Ari E. ; Sanhueza, Mario ; Kim, Eugene ; de Haro, Maria ; DeGiacomo, Francesco ; Torcassi, Cameron ; Holcomb, Jennifer ; Gafni, Juliette ; Mooney, Sean D. ; Botas, Juan ; Ellerby, Lisa M. ; Hughes, Robert E.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2012-11, Vol.8 (11), p.e1003042
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Smaug/SAMD4A Restores Translational Activity of CUGBP1 and Suppresses CUG-Induced Myopathy
Author / Creator:de Haro, Maria ; Al-Ramahi, Ismael ; Jones, Karlie R. ; Holth, Jerrah K. ; Timchenko, Lubov T. ; Botas, Juan
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2013-04, Vol.9 (4), p.e1003445-e1003445
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dAtaxin-2 Mediates Expanded Ataxin-1-Induced Neurodegeneration in a Drosophila Model of SCA1
Author / Creator:Al-Ramahi, Ismael ; Pérez, Alma M ; Lim, Janghoo ; Zhang, Minghang ; Sorensen, Rie ; de Haro, Maria ; Branco, Joana ; Pulst, Stefan M ; Zoghbi, Huda Y ; Botas, Juan
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2007-12, Vol.3 (12), p.e234-e234
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Evolutionary Theory and Machine Learning: New Inroads Into Sex‐specific AD Susceptibility Genes and Pathways Significantly Improve Risk Prediction
Author / Creator:Al‐Ramahi, Ismael ; Asmussen, Jenn ; Botas, Juan ; Katsonis, Panagiotis ; Lagiesetty, Yashwanth ; Lee, Kwanghyuk Danny ; Nazem, Fatemeh ; Samieinasab, Maryam ; Wang, Chen ; Wilhelm, Kevin ; Lichtarge, Olivier
Publisher:Hoboken: John Wiley and Sons Inc
Journal title:Alzheimer's & dementia, 2024-12, Vol.20 (S1), p.n/a
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The SMOC1 proteomics network M42 controls multiple signaling modalities, brain homeostasis and toxicity in fly Alzheimer’s disease models
Author / Creator:Li‐Kroeger, David ; Al‐Ramahi, Ismael ; Smith, Nathaniel ; Marella, Aditi ; Amoh, Bismark K ; Saladi, Saathwik ; Botas, Juan ; Seyfried, Nicholas T ; Levey, Allan I. ; Shulman, Joshua M
Publisher:Hoboken: John Wiley and Sons Inc
Journal title:Alzheimer's & dementia, 2024-12, Vol.20 (S1), p.n/a
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Showing 1 to 20 of 38 results

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Integrated genomics and proteomics define huntingtin CAG length–dependent networks in mice

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Network Organization of the Huntingtin Proteomic Interactome in Mammalian Brain

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Functional variants identify sex-specific genes and pathways in Alzheimer’s Disease

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Cross-species genetic screens identify transglutaminase 5 as a regulator of polyglutamine-expanded ataxin-1

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RAS–MAPK–MSK1 pathway modulates ataxin 1 protein levels and toxicity in SCA1

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Functional screening of lysosomal storage disorder genes identifies modifiers of alpha-synuclein neurotoxicity

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TRIM28 regulates the nuclear accumulation and toxicity of both alpha-synuclein and tau

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Tau polarizes an aging transcriptional signature to excitatory neurons and glia

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TORC1 Inhibition by Rapamycin Promotes Antioxidant Defences in a Drosophila Model of Friedreich’s Ataxia

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A striatal-enriched intronic GPCR modulates huntingtin levels and toxicity

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Downregulation of glial genes involved in synaptic function mitigates Huntington's disease pathogenesis

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Inhibition of PIP4Kγ ameliorates the pathological effects of mutant huntingtin protein

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Metal Homeostasis Regulators Suppress FRDA Phenotypes in a Drosophila Model of the Disease

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Longitudinal multi-omics in alpha-synuclein Drosophila model discriminates disease- from age-associated pathologies in Parkinson’s disease

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Detailed analysis of leucokinin-expressing neurons and their candidate functions in the Drosophila nervous system

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A Genome-Scale RNA–Interference Screen Identifies RRAS Signaling as a Pathologic Feature of Huntington's Disease

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Smaug/SAMD4A Restores Translational Activity of CUGBP1 and Suppresses CUG-Induced Myopathy

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dAtaxin-2 Mediates Expanded Ataxin-1-Induced Neurodegeneration in a Drosophila Model of SCA1

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Evolutionary Theory and Machine Learning: New Inroads Into Sex‐specific AD Susceptibility Genes and Pathways Significantly Improve Risk Prediction

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The SMOC1 proteomics network M42 controls multiple signaling modalities, brain homeostasis and toxicity in fly Alzheimer’s disease models

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